Factsheet for VIT_11s0052g00420.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0052g00410.t01	Wine grape	cytosol	95.01	93.37
VIT_11s0016g05230.t01	Wine grape	cytosol	75.95	74.86
KRH54972	Soybean	cytosol	66.57	65.61
GSMUA_Achr7P10120_001	Banana	cytosol	65.69	64.18
PGSC0003DMT400088882	Potato	cytosol, nucleus, peroxisome	63.34	61.89
Solyc09g091700.2.1	Tomato	cytosol, nucleus, peroxisome	55.43	60.58
Zm00001d046491_P001	Maize	cytosol, peroxisome, plastid	57.48	56.98
Os06t0602900-01	Rice	cytosol	56.3	56.14
TraesCS7B01G252600.1	Wheat	cytosol	56.01	55.85
HORVU7Hr1G083970.1	Barley	cytosol	56.01	55.85
TraesCS7A01G374800.1	Wheat	cytosol	55.72	55.56
Zm00001d046490_P001	Maize	cytosol, peroxisome, plastid	57.77	55.34
EER90008	Sorghum	cytosol	55.72	54.91
VIT_05s0094g01130.t01	Wine grape	cytosol	50.15	50.0
VIT_05s0094g01160.t01	Wine grape	cytosol	49.85	49.28
VIT_05s0094g01140.t01	Wine grape	cytosol	49.27	49.12
VIT_05s0094g01230.t01	Wine grape	cytosol	39.59	48.91
VIT_00s0220g00130.t01	Wine grape	cytosol	49.56	48.84
VIT_05s0094g01120.t01	Wine grape	cytosol	48.97	48.41
VIT_05s0094g01150.t01	Wine grape	cytosol	47.51	47.09
VIT_05s0094g01260.t01	Wine grape	cytosol	46.63	46.49
VIT_05s0094g01250.t01	Wine grape	cytosol	37.54	45.88
TraesCS7D01G348600.1	Wheat	cytosol	56.6	45.31
VIT_12s0059g00670.t01	Wine grape	cytoskeleton, cytosol, peroxisome	36.95	34.9
VIT_12s0059g00690.t01	Wine grape	cytoskeleton, cytosol, peroxisome	35.78	33.8
GSMUA_Achr7P10110_001	Banana	cytosol	65.1	32.41
VIT_03s0063g00610.t01	Wine grape	peroxisome	26.69	14.35
VIT_04s0043g00180.t01	Wine grape	cytosol, extracellular, nucleus	4.4	11.36

Protein Annotations

EntrezGene:100244428	wikigene:100244428	EntrezGene:100249583	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3
InterPro:ADH_C	EMBL:AM462010	ProteinID:CAN63564	ProteinID:CAN63564.1	ProteinID:CCB44676	ProteinID:CCB44676.1
UniProt:F6GXJ0	EMBL:FN594964	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100244428	wikigene:LOC100244428	EntrezGene:LOC100249583
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF16884	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF12
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0002108F7D	ArrayExpress:VIT_11s0052g00420	EnsemblPlantsGene:VIT_11s0052g00420
EnsemblPlants:VIT_11s0052g00420.t01	RefSeq:XP_003633205	RefSeq:XP_003633205.1	RefSeq:XP_003633205.2	:	:

Description

No Description!

Coordinates

chr11:-:17767743..17771542

Molecular Weight (calculated)

37051.7 Da

IEP (calculated)

6.779

GRAVY (calculated)

-0.033

Length

341 amino acids

Sequence
(BLAST)

001: MEVTNKYVTV KTHIDGSSPQ ESDFELKTAA LNLSVEPGSK DVIVKNLYVS IDPYQINRMK RVCSSQKLVS TADGITPGQA ISAHGLGRVV ASGNPEFEKD
101: DLVVGLINWE EYTIVKGGNI LRKLDPMGFP LSYHLGVLGL SGLTAYAGFV EVCKPKKGEK VFVSAACGSV GNLVGQYAKL FGCHVVGCAG TKQKVELLKG
201: KLGFDDAFNY KEETDLKSTL KRYFPDGMDI YFDNVGGKML EASVANMNPF GRIAVCGIIS EYTGIGERAA PDMIDIVYKR LKIQGFLVID YLKGMDDFIS
301: TMSNHLSTGK IHVLEDISQG VESISSAFVG LFQGDNVGKR W

Best Arabidopsis Sequence Match ( AT5G16960.1 )
(BLAST)

001: MATTINKQVV LLDYVTGFAK ESDLVITSTT IDLRVLKGSM TALVKNLYLS CDPYMRNRMR KPDPLSPATA QSFTPGKPIS GFGVSKVIDS GHSDYEEGDL
101: IWGAVGWEEY SVITPIPNLH FKIHHTNFPL SYYTGLLGMP GMTAYVGFYE ICTPKKGDTV FVSAASGAVG QLVGQFAKLM GCYVVGSAGS KEKVDLLKNK
201: FGFDDAFNYK EEHNLIGALK RCFPEGIDIY FENVGGKMLD AVILNMRPHG RIAACGMISQ YNLKNPEGIY GLSLITYKRI RIEGFNCFDY FHKYSEFLEF
301: VVPYIKEGKI KYVEDVADGL ESAPAALVGL FHGKNVGKQL VVVSPS

Arabidopsis Description

Quinone oxidoreductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LFK5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.