Factsheet for PGSC0003DMT400088882

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 3
plastid 1
peroxisome 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g091700.2.1	Tomato	cytosol, nucleus, peroxisome	79.94	89.42
PGSC0003DMT400095859	Potato	cytosol	42.98	80.65
VIT_11s0016g05230.t01	Wine grape	cytosol	70.2	70.81
KRH54972	Soybean	cytosol	65.33	65.9
VIT_11s0052g00410.t01	Wine grape	cytosol	63.61	63.98
VIT_11s0052g00420.t01	Wine grape	cytosol	61.89	63.34
PGSC0003DMT400071464	Potato	cytosol	14.33	60.24
GSMUA_Achr7P10120_001	Banana	cytosol	59.89	59.89
TraesCS7B01G252600.1	Wheat	cytosol	56.45	57.6
HORVU7Hr1G083970.1	Barley	cytosol	55.87	57.02
TraesCS7A01G374800.1	Wheat	cytosol	55.3	56.43
Zm00001d046491_P001	Maize	cytosol, peroxisome, plastid	55.01	55.81
EER90008	Sorghum	cytosol	54.44	54.91
Os06t0602900-01	Rice	cytosol	53.58	54.68
Zm00001d046490_P001	Maize	cytosol, peroxisome, plastid	55.3	54.21
PGSC0003DMT400083197	Potato	cytosol	36.1	51.64
PGSC0003DMT400012544	Potato	cytosol	49.0	49.85
PGSC0003DMT400075488	Potato	cytosol	46.99	47.81
PGSC0003DMT400020187	Potato	cytosol	45.27	46.33
TraesCS7D01G348600.1	Wheat	cytosol	56.16	46.01
PGSC0003DMT400079649	Potato	cytosol	44.7	45.48
PGSC0003DMT400060048	Potato	cytosol	45.27	44.26
PGSC0003DMT400020183	Potato	cytosol	20.63	42.11
PGSC0003DMT400088089	Potato	cytosol	12.32	39.45
GSMUA_Achr7P10110_001	Banana	cytosol	59.03	30.07
PGSC0003DMT400012166	Potato	cytosol	10.32	27.07
PGSC0003DMT400028517	Potato	cytosol	12.32	26.06
PGSC0003DMT400066606	Potato	cytosol, endoplasmic reticulum, vacuole	27.51	15.14

Protein Annotations

EntrezGene:102585543	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf
UniProt:M1DGY3	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF16884	EnsemblPlantsGene:PGSC0003DMG400038453	PGSC:PGSC0003DMG400038453
EnsemblPlants:PGSC0003DMT400088882	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF12	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI0002950790	RefSeq:XP_006360352.1	:	:	:

Description

Alcohol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400038453]

Coordinates

chr9:+:58578007..58579056

Molecular Weight (calculated)

38001.8 Da

IEP (calculated)

7.926

GRAVY (calculated)

-0.033

Length

349 amino acids

Sequence
(BLAST)

001: MEIKNKYVTI KTNINAAPKE PHFEIKVENV SLIVETESES KDVVVKNLFV SIDPYQINRM KSQSSSQGAI SFATAISPGD SIDSYGVGRV LFSHRPDIKK
101: GDLVAGLLTW GEYSIVKEGS LLNKLDPNMG FPLSYHVGVL GFSGLTAYGG FFEVCKPKPG EKVFVSAGSG SIGHLVGQYA KLLGCYVVGS AGSQEKVNFL
201: KERLGFDDAF NYKQETDLKS ALKRCFPQGI DVYFDNVGGR MLEAAVANMN SFGRVAVCGV ISEYTNATTR AAPEMLDIIY KRITIKGFLA ADLMNVYAEF
301: LSKTVEYLKS GKLKTIEDVS RGVESIPSAF IGLFNGENIG KKIVKVADE

Best Arabidopsis Sequence Match ( AT3G03080.1 )
(BLAST)

001: MATSGNATVA NKQVILRDYV TGFPKESDLI FTDSTIDLKI PEGSKTVLVK NLYLSCDPYM RIRMGKPDPG TAALAPHYIP GEPIYGFSVS KVIDSGHPDY
101: KKGDLLWGLV GWGEYSLITP DFSHYKIQHT DVPLSYYTGL LGMPGMTAYA GFYEICSPKK GETVFVSAAS GAVGQLVGQF AKIMGCYVVG SAGSNEKVDL
201: LKNKFGFDDA FNYKAEPDLN AALKRCFPEG IDIYFENVGG KMLDAVLLNM KLHGRIAVCG MISQYNLEDQ EGVHNLANVI YKRIRIKGFV VSDYFDKHLK
301: FLDFVLPYIR EGKITYVEDV VEGLENGPSA LLGLFHGKNV GKQLIAVARE

Arabidopsis Description

Putative NADP-dependent oxidoreductase [Source:UniProtKB/TrEMBL;Acc:Q9M9M7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.