Factsheet for PGSC0003DMT400066606

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 2
vacuole 2
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, vacuole
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
PProwler:	peroxisome
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g108150.2.1	Tomato	nucleus	93.22	93.22
VIT_03s0063g00610.t01	Wine grape	peroxisome	76.81	76.81
KRH50260	Soybean	extracellular	24.45	74.52
KRH71155	Soybean	nucleus	72.24	72.35
CDY16520	Canola	cytosol, peroxisome, plastid	69.4	69.95
CDY51039	Canola	cytosol, peroxisome, plastid	69.09	69.52
CDY28090	Canola	cytosol, peroxisome, plastid	69.09	69.52
CDY32846	Canola	cytosol, peroxisome, plastid	68.93	69.48
Bra018802.1-P	Field mustard	cytosol, peroxisome, plastid	68.77	69.32
GSMUA_Achr6P04320_001	Banana	cytosol	68.93	69.04
EER96863	Sorghum	peroxisome	68.45	68.45
Os09t0459800-01	Rice	nucleus, plasma membrane	68.3	68.3
Bra014212.1-P	Field mustard	cytosol, peroxisome, plastid	69.24	67.54
Zm00001d020727_P016	Maize	mitochondrion	67.51	67.51
TraesCS5A01G240300.1	Wheat	nucleus	66.88	66.88
TraesCS5D01G246800.2	Wheat	peroxisome	66.72	66.72
TraesCS5B01G238400.1	Wheat	peroxisome	66.72	66.72
AT1G49670.2	Thale cress	peroxisome	67.51	65.64
TraesCS5A01G240400.1	Wheat	peroxisome	65.3	65.3
OQU89618	Sorghum	peroxisome	65.62	64.9
TraesCS5B01G238500.1	Wheat	peroxisome	64.83	64.83
TraesCS5D01G247000.2	Wheat	peroxisome	59.15	63.45
HORVU5Hr1G068630.9	Barley	plastid	64.98	63.09
Zm00001d020728_P005	Maize	cytosol, peroxisome, plasma membrane	62.93	61.01
KRG88432	Soybean	cytosol	24.13	60.24
OQU87352	Sorghum	cytosol	12.62	45.45
PGSC0003DMT400071464	Potato	cytosol	4.89	37.35
PGSC0003DMT400083197	Potato	cytosol	13.56	35.25
PGSC0003DMT400075488	Potato	cytosol	16.56	30.61
PGSC0003DMT400088089	Potato	cytosol	5.21	30.28
PGSC0003DMT400060048	Potato	cytosol	16.88	29.97
PGSC0003DMT400079649	Potato	cytosol	16.09	29.74
PGSC0003DMT400012544	Potato	cytosol	16.09	29.74
PGSC0003DMT400020187	Potato	cytosol	15.14	28.15
PGSC0003DMT400088882	Potato	cytosol, nucleus, peroxisome	15.14	27.51
PGSC0003DMT400095859	Potato	cytosol	7.1	24.19
PGSC0003DMT400012166	Potato	cytosol	5.05	24.06
PGSC0003DMT400020183	Potato	cytosol	6.31	23.39
PGSC0003DMT400028517	Potato	cytosol	3.79	14.55

Protein Annotations

EntrezGene:102594537	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	InterPro:ADH_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005777	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:M1CFV7	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106
PFAM:PF00107	PFAM:PF08240	EnsemblPlantsGene:PGSC0003DMG400025890	PGSC:PGSC0003DMG400025890	EnsemblPlants:PGSC0003DMT400066606	InterPro:PKS_ER
PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR43677	PANTHER:PTHR43677:SF3	InterPro:SDR_fam
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI0002969AA6	RefSeq:XP_006346420.1
SEG:seg	:	:	:	:	:

Description

NADPH oxidoreductase [Source:PGSC_GENE;Acc:PGSC0003DMG400025890]

Coordinates

chr1:-:84539605..84558799

Molecular Weight (calculated)

68552.5 Da

IEP (calculated)

8.322

GRAVY (calculated)

0.142

Length

634 amino acids

Sequence
(BLAST)

001: MELKPGLSAL VTGGASGIGK ALCLALAKKG VFVTIVDFSE EKGKEVAGLA EKECAEFHSG LEFPVVMFIR CDVSNTGELK AAFEKHFVTY GGLDICINSA
101: GIGDIVPFHN DRTDGSKSWR HVVNVNLVAV IDCTRLAIQA MQTDQKPGVI INLGSSSGLY PMYTGPIYSA TKGGVVMFTR SLARFKHQGI RINVLCPEYV
201: QTDLAEKAVG SYVDRFGGYV PMELVVEGAF ELIRDESKAG SCLWITNRRG LEYWPTPAEE AKYLLRSSKT RKKSLVTVPM DLQIPHSFEK VVVHTLSHNF
301: RSATRIVRTE LRLPLKADHV LLKVIYAGVN ASDVNFSSGR YFSGNGKDIT SLLPLDSGFE AVGIIAAIGD AVRNLKIGMP AAIMTFGGYA EFVMVPSKHI
401: LPVAKPDPEV LAMLTSGLTA SIALEKAAQM ESGKVVLVTA AAGATGQFAV QLAKLAGNTV IATCGGYVKA KLLKDLGVDR AIDYKVEDIK SVLKKEFPKG
501: TDIVYESVGG EMFDICLNAL AVYGRLVVIG MISQYQGEHG WKPRNYTGIC EKLLAKSQTV AGFFLIQYAH LWQEHLDRLV NLFSSGKLKI GIDPKQFVGL
601: HSVADAVEYL HSGESAGKVV VCVDPTYAQQ PAKL

Best Arabidopsis Sequence Match ( AT1G49670.1 )
(BLAST)

001: MEIKPGLSAL VTGGASGIGR ALCLALAEKG VFVTVADFSE EKGQETTSLV REANAKFHQG LSFPSAIFVK CDVTNRGDLL AAFDKHLATF GTLDICINNA
101: GISTPLRFDK DDTDGSKSWK HTINVDLIAV VEGTQLAIKA MKAKQKPGVI INMGSAAGLY PMPVDPIYAA SKAGVVLFTR SLAYYRRQGI RINVLCPEFI
201: KTDLAEAIDA SILESIGGYM SMDMLIKGAF ELITDEKKAG ACLWITKRRG LEYWPTPMEE TKYLVGSSSR KRPSFKVSTK IEFPQSFEKM IVHTLSHKFR
301: SATRIVRAPL QLPIGPHQVL LKIIYAGVNA SDVNFSSGRY FTGGSPKLPF DAGFEGVGLI AAVGESVKNL EVGTPAAVMT FGAYSEYMIV SSKHVLPVPR
401: PDPEVVAMLT SGLTALIALE KAGQMKSGET VLVTAAAGGT GQFAVQLAKL SGNKVIATCG GSEKAKLLKE LGVDRVIDYK SENIKTVLKK EFPKGVNIIY
501: ESVGGQMFDM CLNALAVYGR LIVIGMISQY QGEKGWEPAK YPGLCEKILA KSQTVAGFFL VQYSQLWKQN LDKLFNLYAL GKLKVGIDQK KFIGLNAVAD
601: AVEYLHSGKS TGKVVVCIDP AFEQKTSRL

Arabidopsis Description

NQRARP protein (REF) [Source:TAIR;Acc:AT1G49670]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.