Factsheet for Zm00001d020728_P005

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU89618	Sorghum	peroxisome	84.4	86.12
TraesCS5B01G238400.1	Wheat	peroxisome	73.85	76.18
TraesCS5D01G246800.2	Wheat	peroxisome	73.55	75.87
TraesCS5A01G240300.1	Wheat	nucleus	73.55	75.87
Os09t0459800-01	Rice	nucleus, plasma membrane	73.55	75.87
TraesCS5A01G240400.1	Wheat	peroxisome	73.39	75.71
Zm00001d020727_P016	Maize	mitochondrion	72.94	75.24
TraesCS5B01G238500.1	Wheat	peroxisome	72.94	75.24
TraesCS5D01G247000.2	Wheat	peroxisome	67.74	74.96
HORVU5Hr1G068630.9	Barley	plastid	72.63	72.74
KRH50260	Soybean	extracellular	22.78	71.63
GSMUA_Achr6P04320_001	Banana	cytosol	63.61	65.72
VIT_03s0063g00610.t01	Wine grape	peroxisome	63.15	65.14
CDY16520	Canola	cytosol, peroxisome, plastid	61.31	63.75
KRH71155	Soybean	nucleus	61.47	63.51
CDY32846	Canola	cytosol, peroxisome, plastid	61.01	63.43
PGSC0003DMT400066606	Potato	cytosol, endoplasmic reticulum, vacuole	61.01	62.93
Solyc01g108150.2.1	Tomato	nucleus	61.01	62.93
CDY28090	Canola	cytosol, peroxisome, plastid	60.4	62.7
Bra018802.1-P	Field mustard	cytosol, peroxisome, plastid	60.24	62.64
CDY51039	Canola	cytosol, peroxisome, plastid	60.24	62.54
Bra014212.1-P	Field mustard	cytosol, peroxisome, plastid	61.31	61.69
AT1G49670.2	Thale cress	peroxisome	58.56	58.74
KRG88432	Soybean	cytosol	22.32	57.48
OQU87352	Sorghum	cytosol	13.91	51.7
Zm00001d049032_P001	Maize	cytosol	16.67	30.36
Zm00001d007285_P002	Maize	peroxisome	15.6	28.81
Zm00001d049031_P001	Maize	peroxisome	11.01	28.8
Zm00001d023990_P001	Maize	cytosol	15.14	28.7
Zm00001d046491_P001	Maize	cytosol, peroxisome, plastid	14.53	27.62
Zm00001d008377_P001	Maize	extracellular, mitochondrion	14.37	26.26
Zm00001d046490_P001	Maize	cytosol, peroxisome, plastid	14.07	25.84
Zm00001d042555_P001	Maize	cytosol, plastid	14.37	20.3

Protein Annotations

EntrezGene:100381799	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	UniProt:A0A1D6I5X9	InterPro:ADH_C
InterPro:ADH_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM55502.1
PFAM:PF00106	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	PRINTS:PR00080	PRINTS:PR00081
ScanProsite:PS00061	ScanProsite:PS01162	PANTHER:PTHR43677	PANTHER:PTHR43677:SF3	InterPro:Quin_OxRdtase/zeta-crystal_CS	InterPro:SDR_fam
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI000843F06B	EnsemblPlantsGene:Zm00001d020728
EnsemblPlants:Zm00001d020728_P005	EnsemblPlants:Zm00001d020728_T005	:	:	:	:

Description

ARP protein (REF)

Coordinates

chr7:+:130390863..130417870

Molecular Weight (calculated)

70276.6 Da

IEP (calculated)

9.376

GRAVY (calculated)

0.217

Length

654 amino acids

Sequence
(BLAST)

001: MELKPGLSAL VTGGASGIGK ALCIALARKG LFVTVIDLSE ENGREVVSLV QKENKHVHQY ARVPSAIFIK CDVTNGEDLA AAFRKHVDTF GGLDICINCA
101: GFVNKSLVYD DKSDGTSTWR RAVNVNLVAV IDGTRIASQV MRSQKKPGVI INISSVAGIY PMSYEPVYSG TKGGVVMFTR SLAPLKRYGI RVNVLCPEFV
201: QTNMGEQVNR VLVDALGGFL KVEDVVNGSP ITFKACITFF VVLEDKSMLS NSTPTPAIRQ LRRGIISATW AFFDVIKGGS SGVARRPESS NSLLNILVLH
301: PGIVGEGVVH TLSHNFRNAT RLERVRLRLP IEPHNTLVKI IYAGVNASDV NFSSGRYFSV NSKEAASHLP FDAGFEAVGI VASVGDSVKH IKVGTSVALM
401: TFGSYAEFVL VLLSMTSKSL IPVPRPDPEV VAMLTSGLTA SIALEKAGQM ISGQVVLVTA AAGGTGQFAV QLAKLAGNKV VATCGGESKS MFLTSLGVDR
501: VINYQSEKIK DVLKKEFPRG VDIIYESVGG ETFDVCLNAL AVYGRLIVIG MISQYQGEGG WKPQNYTGLC EKILGKSQTV AGFFLVQYAH LWQDHLEKLF
601: NLYSSGKLKV FVDPKKFVGV ASVADAVEYL HSGRSVGKVV VCMDLSYGQT LAKL

Best Arabidopsis Sequence Match ( AT1G49670.1 )
(BLAST)

001: MEIKPGLSAL VTGGASGIGR ALCLALAEKG VFVTVADFSE EKGQETTSLV REANAKFHQG LSFPSAIFVK CDVTNRGDLL AAFDKHLATF GTLDICINNA
101: GISTPLRFDK DDTDGSKSWK HTINVDLIAV VEGTQLAIKA MKAKQKPGVI INMGSAAGLY PMPVDPIYAA SKAGVVLFTR SLAYYRRQGI RINVLCPEFI
201: KTDLAEAIDA SILESIGGYM SMDMLIKGAF ELITDEKKAG ACLWITKRRG LEYWPTPMEE TKYLVGSSSR KRPSFKVSTK IEFPQSFEKM IVHTLSHKFR
301: SATRIVRAPL QLPIGPHQVL LKIIYAGVNA SDVNFSSGRY FTGGSPKLPF DAGFEGVGLI AAVGESVKNL EVGTPAAVMT FGAYSEYMIV SSKHVLPVPR
401: PDPEVVAMLT SGLTALIALE KAGQMKSGET VLVTAAAGGT GQFAVQLAKL SGNKVIATCG GSEKAKLLKE LGVDRVIDYK SENIKTVLKK EFPKGVNIIY
501: ESVGGQMFDM CLNALAVYGR LIVIGMISQY QGEKGWEPAK YPGLCEKILA KSQTVAGFFL VQYSQLWKQN LDKLFNLYAL GKLKVGIDQK KFIGLNAVAD
601: AVEYLHSGKS TGKVVVCIDP AFEQKTSRL

Arabidopsis Description

NQRARP protein (REF) [Source:TAIR;Acc:AT1G49670]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.