Factsheet for TraesCS5D01G247000.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G238500.1	Wheat	peroxisome	97.12	90.54
TraesCS5A01G240400.1	Wheat	peroxisome	97.12	90.54
HORVU5Hr1G068630.9	Barley	plastid	95.6	86.52
TraesCS5D01G246800.2	Wheat	peroxisome	81.56	76.03
OQU89618	Sorghum	peroxisome	81.22	74.88
Os09t0459800-01	Rice	nucleus, plasma membrane	79.7	74.29
EER96863	Sorghum	peroxisome	79.53	74.13
Zm00001d020727_P016	Maize	mitochondrion	78.17	72.87
Zm00001d020728_P005	Maize	cytosol, peroxisome, plasma membrane	74.96	67.74
GSMUA_Achr6P04320_001	Banana	cytosol	68.02	63.51
VIT_03s0063g00610.t01	Wine grape	peroxisome	65.82	61.36
KRH71155	Soybean	nucleus	64.13	59.87
CDY16520	Canola	cytosol, peroxisome, plastid	63.45	59.62
Solyc01g108150.2.1	Tomato	nucleus	63.62	59.31
PGSC0003DMT400066606	Potato	cytosol, endoplasmic reticulum, vacuole	63.45	59.15
CDY32846	Canola	cytosol, peroxisome, plastid	62.94	59.14
CDY28090	Canola	cytosol, peroxisome, plastid	62.27	58.41
CDY51039	Canola	cytosol, peroxisome, plastid	62.1	58.25
Bra018802.1-P	Field mustard	cytosol, peroxisome, plastid	61.93	58.19
Bra014212.1-P	Field mustard	cytosol, peroxisome, plastid	63.62	57.85
KRG88432	Soybean	cytosol	24.03	55.91
AT1G49670.2	Thale cress	peroxisome	60.74	55.06
KRH50260	Soybean	extracellular	18.27	51.92
OQU87352	Sorghum	cytosol	8.63	28.98
TraesCS5D01G103800.1	Wheat	cytosol	14.55	24.78
TraesCS2D01G068700.1	Wheat	cytosol	13.87	23.63
TraesCS5D01G310600.1	Wheat	cytosol	13.71	23.34
TraesCS3D01G396000.1	Wheat	cytosol	8.12	23.08
TraesCS5D01G310500.1	Wheat	cytosol	13.37	23.03
TraesCS2D01G068900.1	Wheat	cytosol	13.03	22.25
TraesCS3D01G396200.1	Wheat	cytosol, peroxisome, plastid	13.2	22.16
TraesCS3D01G087400.1	Wheat	cytosol	12.86	21.35
TraesCS7D01G348600.1	Wheat	cytosol	12.86	17.84

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	InterPro:ADH_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491
GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PFAM:PF00107	PFAM:PF08240
PFAM:PF13602	InterPro:PKS_ER	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	ScanProsite:PS01162
PANTHER:PTHR43677	PANTHER:PTHR43677:SF3	InterPro:Quin_OxRdtase/zeta-crystal_CS	InterPro:SDR_fam	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	EnsemblPlantsGene:TraesCS5D01G247000	EnsemblPlants:TraesCS5D01G247000.2	:	:

Description

No Description!

Coordinates

chr5D:+:354717480..354735921

Molecular Weight (calculated)

63949.7 Da

IEP (calculated)

9.607

GRAVY (calculated)

0.046

Length

591 amino acids

Sequence
(BLAST)

001: MKLEPGMSAL VTGGGSGIGK ALCIALAHKG LFVTVVDFSE EHGEQVASLV QKRRNQFHGD SKVPSAIFVK CDVTDADALA AAFGKHVHLY GGLDVCINCA
101: GFVNKSLVYD DTSNGTKTWR RAVNVNLVAV IDGTRIATQI MRSQKKPGAI LNFGSVAGLY PMHYEPIYSG TKGGVIMFTR SLAPLKRHGI RVNVICPEFV
201: QTNMGEQVNR ILVDALGGFL KMEDVINGAF ELIEDESKAG ACLWISKRRG MVYWPTSEEE KKYLVYATKS KMTVTKNRFP SIQTPEFFEK ITVHMLSHNF
301: RNATRIDRVR LRLPMEPHSA LVKIIYAGVN ASDVNFTSGR YFSGNAKEAS AHLPFDAGFE AVGIVASVGD SVRHIKVGTA VALMTFGSYA EFTVVPAKHL
401: LLVPRPDPEV VAMLTSGLTA SISLEKSGQM TSGQVVLVTA AAGGTGQFAV QLAKLAGNKV IATCGGGNKA ALLASLGVDR VINYQHEKIK DYQGKDGWMP
501: RNYYGLCEKI LGKSQTVAGF FLIQYADLWQ KHLDKLFDLH ASGKLKVSLD PKKFVGVASV ADAVEHLHSG RSVGKVVVCM DPAYSQTLAK L

Best Arabidopsis Sequence Match ( AT1G49670.1 )
(BLAST)

001: MEIKPGLSAL VTGGASGIGR ALCLALAEKG VFVTVADFSE EKGQETTSLV REANAKFHQG LSFPSAIFVK CDVTNRGDLL AAFDKHLATF GTLDICINNA
101: GISTPLRFDK DDTDGSKSWK HTINVDLIAV VEGTQLAIKA MKAKQKPGVI INMGSAAGLY PMPVDPIYAA SKAGVVLFTR SLAYYRRQGI RINVLCPEFI
201: KTDLAEAIDA SILESIGGYM SMDMLIKGAF ELITDEKKAG ACLWITKRRG LEYWPTPMEE TKYLVGSSSR KRPSFKVSTK IEFPQSFEKM IVHTLSHKFR
301: SATRIVRAPL QLPIGPHQVL LKIIYAGVNA SDVNFSSGRY FTGGSPKLPF DAGFEGVGLI AAVGESVKNL EVGTPAAVMT FGAYSEYMIV SSKHVLPVPR
401: PDPEVVAMLT SGLTALIALE KAGQMKSGET VLVTAAAGGT GQFAVQLAKL SGNKVIATCG GSEKAKLLKE LGVDRVIDYK SENIKTVLKK EFPKGVNIIY
501: ESVGGQMFDM CLNALAVYGR LIVIGMISQY QGEKGWEPAK YPGLCEKILA KSQTVAGFFL VQYSQLWKQN LDKLFNLYAL GKLKVGIDQK KFIGLNAVAD
601: AVEYLHSGKS TGKVVVCIDP AFEQKTSRL

Arabidopsis Description

NQRARP protein (REF) [Source:TAIR;Acc:AT1G49670]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.