CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020727_P016	Maize	mitochondrion	96.06	96.06
TraesCS5B01G238400.1	Wheat	peroxisome	86.75	86.75
TraesCS5A01G240300.1	Wheat	nucleus	86.59	86.59
TraesCS5D01G246800.2	Wheat	peroxisome	85.96	85.96
Os09t0459800-01	Rice	nucleus, plasma membrane	85.8	85.8
TraesCS5D01G247000.2	Wheat	peroxisome	74.13	79.53
TraesCS5A01G240400.1	Wheat	peroxisome	79.5	79.5
OQU89618	Sorghum	peroxisome	79.97	79.1
TraesCS5B01G238500.1	Wheat	peroxisome	79.02	79.02
HORVU5Hr1G068630.9	Barley	plastid	79.5	77.18
KRH50260	Soybean	extracellular	24.45	74.52
GSMUA_Achr6P04320_001	Banana	cytosol	71.61	71.72
VIT_03s0063g00610.t01	Wine grape	peroxisome	70.66	70.66
KRH71155	Soybean	nucleus	69.72	69.83
CDY16520	Canola	cytosol, peroxisome, plastid	68.61	69.16
Solyc01g108150.2.1	Tomato	nucleus	68.61	68.61
CDY32846	Canola	cytosol, peroxisome, plastid	67.98	68.52
PGSC0003DMT400066606	Potato	cytosol, endoplasmic reticulum, vacuole	68.45	68.45
CDY28090	Canola	cytosol, peroxisome, plastid	67.35	67.78
Bra018802.1-P	Field mustard	cytosol, peroxisome, plastid	67.19	67.73
CDY51039	Canola	cytosol, peroxisome, plastid	67.19	67.62
Bra014212.1-P	Field mustard	cytosol, peroxisome, plastid	68.61	66.92
AT1G49670.2	Thale cress	peroxisome	65.93	64.11
KRG88432	Soybean	cytosol	24.13	60.24
OQU87352	Sorghum	cytosol	13.88	50.0
KXG28081	Sorghum	peroxisome	17.82	31.83
OQU83135	Sorghum	cytosol	17.19	30.97
EES08221	Sorghum	cytosol	17.03	30.68
KXG23283	Sorghum	cytosol	13.25	29.89
EES16901	Sorghum	cytosol	16.56	29.75
EES02675	Sorghum	cytosol, mitochondrion, peroxisome	16.4	28.89
EER90008	Sorghum	cytosol	15.14	27.75
EES01886	Sorghum	extracellular	16.88	16.24

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	EntrezGene:8063708	InterPro:ADH_C	InterPro:ADH_N
UniProt:C5X2C6	EnsemblPlants:EER96863	ProteinID:EER96863	ProteinID:EER96863.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0055114
InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER
PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	ScanProsite:PS01162	PANTHER:PTHR43677	PANTHER:PTHR43677:SF3
InterPro:Quin_OxRdtase/zeta-crystal_CS	InterPro:SDR_fam	SMART:SM00829	EnsemblPlantsGene:SORBI_3002G226900	SUPFAM:SSF50129	SUPFAM:SSF51735
unigene:Sbi.16567	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI0001A83619	RefSeq:XP_002460342.1	:	:

Description

hypothetical protein

Coordinates

chr2:+:61878966..61894307

Molecular Weight (calculated)

68944.7 Da

IEP (calculated)

8.908

GRAVY (calculated)

0.022

Length

634 amino acids

Sequence
(BLAST)

001: MELKPGMSAL VTGGASGIGK ALCIAFARRG LFVTVVDFSE ENGREVATLV QKENGKFHGD LRVPSCLFVK CDVSNADNLA ACFEKHVHTY GGLDICINCA
101: GIANKTLVYN DTSDGTRTWR HAVNVNLVAV VDGTRIASQI MRDQKKPGVI INIGSAAGLY PMFYDPIYSA TKGGVVMFTR SLAPLKRHGV RVNVLCPEFV
201: QTNMAEQMSR KIIDSTGGYL KMEDVVNGAF ELIQDESKAG ACLWITKRRG MEYWPTPEEQ RKYMVNPNKS KRMLTNNIYP SIRMPEFFEK IVVHTLSHNF
301: RNATRLERVQ LRFPIKAHSA LVKIIYAGVN ASDVNFSSGR YFSGNPKEIA SRLPFDAGFE GVGIVAAVGD SASHIKVGTP VALMTFGSYA EFTEVPAKHL
401: LPVPRPDPEV VAMLTSGLTA SIGLEKAGQM TSGQVVLVTA AAGGTGQFAV QLAKLAGNKV VATCGGESKA ELLASLGVDR VINYRNERVK DVLKKEFPRG
501: VDIIYESVGG EMFDLCLNAL AVHGHLIVIG MISQYQGEDG WKPKNYTGLC EKILAKSQTV AGFFLVQYAH LWQDHLDKLF DLYASGKLKV SLDPKKFVGV
601: ASVPDAVEYL HSGKSVGKVV VCIDPSYSQI VAKL

Best Arabidopsis Sequence Match ( AT1G49670.1 )
(BLAST)

001: MEIKPGLSAL VTGGASGIGR ALCLALAEKG VFVTVADFSE EKGQETTSLV REANAKFHQG LSFPSAIFVK CDVTNRGDLL AAFDKHLATF GTLDICINNA
101: GISTPLRFDK DDTDGSKSWK HTINVDLIAV VEGTQLAIKA MKAKQKPGVI INMGSAAGLY PMPVDPIYAA SKAGVVLFTR SLAYYRRQGI RINVLCPEFI
201: KTDLAEAIDA SILESIGGYM SMDMLIKGAF ELITDEKKAG ACLWITKRRG LEYWPTPMEE TKYLVGSSSR KRPSFKVSTK IEFPQSFEKM IVHTLSHKFR
301: SATRIVRAPL QLPIGPHQVL LKIIYAGVNA SDVNFSSGRY FTGGSPKLPF DAGFEGVGLI AAVGESVKNL EVGTPAAVMT FGAYSEYMIV SSKHVLPVPR
401: PDPEVVAMLT SGLTALIALE KAGQMKSGET VLVTAAAGGT GQFAVQLAKL SGNKVIATCG GSEKAKLLKE LGVDRVIDYK SENIKTVLKK EFPKGVNIIY
501: ESVGGQMFDM CLNALAVYGR LIVIGMISQY QGEKGWEPAK YPGLCEKILA KSQTVAGFFL VQYSQLWKQN LDKLFNLYAL GKLKVGIDQK KFIGLNAVAD
601: AVEYLHSGKS TGKVVVCIDP AFEQKTSRL

Arabidopsis Description

NQRARP protein (REF) [Source:TAIR;Acc:AT1G49670]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.