CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16520	Canola	cytosol, peroxisome, plastid	97.46	97.46
CDY28090	Canola	cytosol, peroxisome, plastid	91.89	91.75
CDY51039	Canola	cytosol, peroxisome, plastid	91.73	91.59
AT1G49670.2	Thale cress	peroxisome	89.19	86.04
KRH50260	Soybean	extracellular	25.6	77.4
VIT_03s0063g00610.t01	Wine grape	peroxisome	72.18	71.61
KRH71155	Soybean	nucleus	69.79	69.35
Solyc01g108150.2.1	Tomato	nucleus	69.63	69.09
PGSC0003DMT400066606	Potato	cytosol, endoplasmic reticulum, vacuole	69.48	68.93
EER96863	Sorghum	peroxisome	68.52	67.98
Zm00001d020727_P016	Maize	mitochondrion	67.89	67.35
TraesCS5A01G240300.1	Wheat	nucleus	67.73	67.19
TraesCS5B01G238400.1	Wheat	peroxisome	67.73	67.19
Os09t0459800-01	Rice	nucleus, plasma membrane	67.57	67.03
TraesCS5D01G246800.2	Wheat	peroxisome	67.57	67.03
GSMUA_Achr6P04320_001	Banana	cytosol	67.41	66.98
OQU89618	Sorghum	peroxisome	65.98	64.74
TraesCS5A01G240400.1	Wheat	peroxisome	64.39	63.88
TraesCS5B01G238500.1	Wheat	peroxisome	64.07	63.56
TraesCS5D01G247000.2	Wheat	peroxisome	59.14	62.94
HORVU5Hr1G068630.9	Barley	plastid	64.07	61.72
Zm00001d020728_P005	Maize	cytosol, peroxisome, plasma membrane	63.43	61.01
KRG88432	Soybean	cytosol	24.01	59.45
OQU87352	Sorghum	cytosol	13.04	46.59
CDX69408	Canola	cytosol	18.28	33.43
CDY16966	Canola	cytosol	18.44	33.05
CDY16150	Canola	cytosol	17.65	31.62
CDY28735	Canola	cytosol	17.33	31.59
CDY43153	Canola	cytosol	17.17	31.4
CDX85014	Canola	cytosol	17.49	31.34
CDY38077	Canola	cytosol	17.01	30.57
CDX85479	Canola	cytosol	17.01	30.57
CDX78721	Canola	cytosol	17.17	30.42
CDY05974	Canola	cytosol	16.38	29.18
CDY60946	Canola	cytosol	16.06	28.86
CDY16411	Canola	cytosol	15.58	28.0
CDX70729	Canola	golgi, plastid	17.33	23.04

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	GO:A0A078H4Q0	UniProt:A0A078H4Q0	InterPro:ADH_C
InterPro:ADH_N	EnsemblPlants:CDY32846	ProteinID:CDY32846	ProteinID:CDY32846.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00052957001	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	ScanProsite:PS01162	PANTHER:PTHR43677
PANTHER:PTHR43677:SF3	InterPro:Quin_OxRdtase/zeta-crystal_CS	InterPro:SDR_fam	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
InterPro:Sc_DH/Rdtase_CS	UniParc:UPI0004EEB0AC	:	:	:	:

Description

BnaC08g02680DBnaC08g02680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H4Q0]

Coordinates

chrLK032300:-:385318..390217

Molecular Weight (calculated)

67753.5 Da

IEP (calculated)

9.171

GRAVY (calculated)

0.095

Length

629 amino acids

Sequence
(BLAST)

001: MEIKPGLSAL VTGGASGIGR ALCLALAEKG VFVTVVDFSE EKGTETASLV QKANAPFHPG LNSPSAIFVK CDVTNRGDLI AAFDKHLATF GTLDICINNA
101: GISNPARFDK YDSDGSRSWR RTINVDLVAV VECTQLAIKA MKGKQKPGVI INMGSAAGLY PMSFDPIYSA AKGGVVLFTR SLAHLKRQGI RINVLCPEFI
201: QTDLAEAIGA SFLQSIGGYM PMDMLIKGAF ELITDESKAG ACLWISNRRG LEYWPTPMEQ AKYLVGSGSR KRTSFKVTST IELPQSFEKI IVHALSHNFR
301: NATRIVRTPL QLPIRPHQVL LKIIYAGVNA SDVNFSSGRY FTGGSPKLPF DAGFEGVGLI AAVGESVKNL EVGTPAAVMT FGAYAEYMIV SSKHVLPVPR
401: PDPEVVAMLT SGLTALTALE KAGEMKSDET VLVTAAAGGT GQFAVQLAKL AGNKVIATCG GSEKAKLLKE LGVDRVIDYK AEDIKTVLKK EFPKGVDIIY
501: ESVGGKMFDL CLNALAVYGR LIVIGMISQY QGEKGWQPSN YPGLCEKILA KSQTVAGFFL VQYSQLWKQN LDKLFNLYSL GKLKVGIDQK KFIGLNTVSD
601: AVEYLHSGKS TGKVVVCIDP TFEQTTSRL

Best Arabidopsis Sequence Match ( AT1G49670.1 )
(BLAST)

001: MEIKPGLSAL VTGGASGIGR ALCLALAEKG VFVTVADFSE EKGQETTSLV REANAKFHQG LSFPSAIFVK CDVTNRGDLL AAFDKHLATF GTLDICINNA
101: GISTPLRFDK DDTDGSKSWK HTINVDLIAV VEGTQLAIKA MKAKQKPGVI INMGSAAGLY PMPVDPIYAA SKAGVVLFTR SLAYYRRQGI RINVLCPEFI
201: KTDLAEAIDA SILESIGGYM SMDMLIKGAF ELITDEKKAG ACLWITKRRG LEYWPTPMEE TKYLVGSSSR KRPSFKVSTK IEFPQSFEKM IVHTLSHKFR
301: SATRIVRAPL QLPIGPHQVL LKIIYAGVNA SDVNFSSGRY FTGGSPKLPF DAGFEGVGLI AAVGESVKNL EVGTPAAVMT FGAYSEYMIV SSKHVLPVPR
401: PDPEVVAMLT SGLTALIALE KAGQMKSGET VLVTAAAGGT GQFAVQLAKL SGNKVIATCG GSEKAKLLKE LGVDRVIDYK SENIKTVLKK EFPKGVNIIY
501: ESVGGQMFDM CLNALAVYGR LIVIGMISQY QGEKGWEPAK YPGLCEKILA KSQTVAGFFL VQYSQLWKQN LDKLFNLYAL GKLKVGIDQK KFIGLNAVAD
601: AVEYLHSGKS TGKVVVCIDP AFEQKTSRL

Arabidopsis Description

NQRARP protein (REF) [Source:TAIR;Acc:AT1G49670]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.