CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16411	Canola	cytosol	97.43	97.43
AT1G65560.1	Thale cress	cytosol	86.86	86.86
VIT_00s0220g00130.t01	Wine grape	cytosol	73.71	74.57
KRH46910	Soybean	cytosol	48.57	74.56
KRH01782	Soybean	nucleus	73.71	74.14
TraesCS3D01G396000.1	Wheat	cytosol	43.14	72.6
Solyc05g055700.2.1	Tomato	cytosol	70.29	68.91
PGSC0003DMT400060048	Potato	cytosol	69.14	67.79
GSMUA_Achr10P...	Banana	cytosol	66.57	67.15
TraesCS3D01G396200.1	Wheat	cytosol, peroxisome, plastid	66.29	65.91
TraesCS3B01G434300.1	Wheat	cytosol	65.14	64.77
TraesCS3A01G401400.1	Wheat	cytosol	64.57	64.2
CDX69408	Canola	cytosol	61.71	62.79
CDY43153	Canola	cytosol	61.43	62.5
CDY28735	Canola	cytosol	60.86	61.74
CDY16966	Canola	cytosol	60.86	60.68
HORVU3Hr1G090120.1	Barley	mitochondrion	40.86	60.59
TraesCSU01G228300.1	Wheat	cytosol	17.14	59.41
HORVU3Hr1G090050.28	Barley	plastid	64.57	59.32
CDX78721	Canola	cytosol	60.0	59.15
CDY38077	Canola	cytosol	59.14	59.14
CDX85479	Canola	cytosol	58.86	58.86
CDY16150	Canola	cytosol	58.86	58.69
CDX85014	Canola	cytosol	58.57	58.4
CDY05974	Canola	cytosol	58.29	57.79
HORVU2Hr1G115460.2	Barley	cytosol	38.0	52.78
Zm00001d042555_P001	Maize	cytosol, plastid	66.0	49.89
HORVU7Hr1G075560.3	Barley	cytosol	35.71	49.6
CDX70729	Canola	golgi, plastid	60.0	44.4
GSMUA_Achr8P08570_001	Banana	extracellular	66.57	40.17
EES01886	Sorghum	extracellular	66.29	35.2
CDY51039	Canola	cytosol, peroxisome, plastid	29.71	16.51
CDY28090	Canola	cytosol, peroxisome, plastid	29.43	16.35
CDY32846	Canola	cytosol, peroxisome, plastid	28.86	16.06
CDY16520	Canola	cytosol, peroxisome, plastid	28.86	16.06

Protein Annotations

EnsemblPlants:CDY60946	EnsemblPlantsGene:GSBRNA2T00030316001	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:A0A078J7D9	GO:GO:0008150
GO:GO:0008152	GO:GO:0055114	InterPro:ADH_C	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43205
PANTHER:PTHR43205:SF8	PFAM:PF00107	PFAM:PF16884	ProteinID:CDY60946	ProteinID:CDY60946.1	SEG:seg
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0004EBDDF8	UniProt:A0A078J7D9	MapMan:50.1.3	:

Description

BnaC02g45290DBnaC02g45290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J7D9]

Coordinates

chrLK033935:-:37904..40134

Molecular Weight (calculated)

38567.5 Da

IEP (calculated)

5.468

GRAVY (calculated)

-0.105

Length

350 amino acids

Sequence
(BLAST)

001: MEEVAVVENK KVILKNYVDG IPTETDMELK MGDTIELKAP KGSSSFLVKN LYLSCDPYMR SRMRDFHGSY LPPFLPGQRI EGFGVARVID SDDPNYTPGE
101: LICGITGWEE YSLLRNSNEL QLRKIQLDDA IPLSYHLGLL GMAGFTAYAG FYEICSPKKG ESVFVSAASG AVGQLVGQLA KLNGCYVVGS AGSKQKVDLL
201: KNKLGFDEAF NYKEEADLDA ALKRYFPEGI NIYFDNVGGS MLDAALLNMK VHGRIALCGM VSLQSLSSSS QGINNLYNAI PKRLRLEGFL QSDHVHIFPQ
301: FLEHVKEYYK EGKIVYIEDM SEGLELAPAA LVGLFSGKNV GKQVVRVANE

Best Arabidopsis Sequence Match ( AT1G65560.1 )
(BLAST)

001: MGEVSVVENK KVILKNYVDG IPTETDMEVK LGETIELKAP KGSSCFLVKN LYLSCDPYMR GRMRDFHGSY LPPFVPGQRI EGFGLARVID SDDTNYKPGD
101: IVSGIIGWEE YSLLRSSDNL QLRNIQLDDD IPLSYHLGLL GMAGFTAYAG FNEICCPKKG DSVFVSAACG AVGQLVGQLA KLHGCYVVGS AGSKQKVEIL
201: KNELGYDEAF NYKEEADLDT ALKRYFPEGI DIYFDNVGGS MLDAALLNMK VRGRIALCGM VSLQSLSTSS QGIKNLYSAI YKRLRLEGFL QSDYLHIFPQ
301: FLENVKRYYK EGKIVYVEDI SEGLDLAPAA LVGLFSGKNI GKQVVRVAKE

Arabidopsis Description

Zinc-binding dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.