Factsheet for TraesCS3A01G401400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G434300.1	Wheat	cytosol	97.16	97.16
TraesCS3D01G396200.1	Wheat	cytosol, peroxisome, plastid	96.02	96.02
TraesCS3D01G396000.1	Wheat	cytosol	56.25	95.19
TraesCSU01G228300.1	Wheat	cytosol	26.99	94.06
HORVU3Hr1G090050.28	Barley	plastid	96.31	88.98
HORVU3Hr1G090120.1	Barley	mitochondrion	55.11	82.2
HORVU2Hr1G115460.2	Barley	cytosol	51.14	71.43
GSMUA_Achr10P...	Banana	cytosol	67.05	68.01
HORVU7Hr1G075560.3	Barley	cytosol	48.58	67.86
KRH46910	Soybean	cytosol	43.75	67.54
VIT_00s0220g00130.t01	Wine grape	cytosol	65.62	66.76
KRH01782	Soybean	nucleus	63.92	64.66
CDY16411	Canola	cytosol	64.2	64.57
CDY60946	Canola	cytosol	64.2	64.57
Bra022471.1-P	Field mustard	cytosol	64.2	64.39
Zm00001d042555_P001	Maize	cytosol, plastid	84.66	64.36
Solyc05g055700.2.1	Tomato	cytosol	63.92	63.03
PGSC0003DMT400060048	Potato	cytosol	63.64	62.75
AT1G65560.1	Thale cress	cytosol	61.65	62.0
TraesCS5A01G303300.1	Wheat	cytosol	47.73	58.95
TraesCS5A01G303400.1	Wheat	cytosol	56.53	57.51
TraesCS2A01G070000.1	Wheat	cytosol	55.97	56.94
TraesCS2A01G069900.1	Wheat	peroxisome	54.83	56.1
TraesCS3A01G087300.1	Wheat	cytosol	55.68	55.52
TraesCS5A01G091700.1	Wheat	cytosol	53.98	55.07
TraesCS4A01G229900.1	Wheat	cytosol	52.84	52.99
TraesCS7A01G374800.1	Wheat	cytosol	46.02	47.37
EES01886	Sorghum	extracellular	86.08	45.98
GSMUA_Achr8P08570_001	Banana	extracellular	68.18	41.38
TraesCS5A01G240300.1	Wheat	nucleus	28.41	15.77
TraesCS5A01G240400.1	Wheat	peroxisome	27.84	15.46

Protein Annotations

EnsemblPlants:TraesCS3A01G401400.1	EnsemblPlantsGene:TraesCS3A01G401400	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:ADH_C	InterPro:GroES-like_sf
InterPro:NAD(P)-bd_dom_sf	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF8	PFAM:PF00107	PFAM:PF16884
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	TIGR:cd08295	MapMan:50.1.3	:

Description

No Description!

Coordinates

chr3A:-:647451213..647453381

Molecular Weight (calculated)

38337.5 Da

IEP (calculated)

6.624

GRAVY (calculated)

-0.012

Length

352 amino acids

Sequence
(BLAST)

001: MEQASPPAGS ARNRKVVLRE YISRAPREDD MALVDGGAVP LRVPEGAAGP AVLVKNLYLS CDPYMRGRMR DFHGSYIPPF KPGSVIEGLG VARVVDSTHP
101: GFVAGDIVSG MTGWEEYSLI DKPEQLNKIQ QSGIPLSYYL GLLGMPGFTA YVGFYEICSP KEGEFVFVSA ASGAVGQIVG QLAKLHGCYV VGSAGTNEKV
201: KLLKDKFGFD AAFNYKEEPD LTAALKRYFP EGIDIYFENV GGPMLDAVLL NMRMHGRIAV CGMVSQHGMT DPAGIHNLFC LVPKRISMKG FIQSDYINLF
301: PQFLDYMTKH YKDGKIAYVE DMSIGLENTP AAFVGLFSGK NVGKQVVCVS QE

Best Arabidopsis Sequence Match ( AT1G65560.1 )
(BLAST)

001: MGEVSVVENK KVILKNYVDG IPTETDMEVK LGETIELKAP KGSSCFLVKN LYLSCDPYMR GRMRDFHGSY LPPFVPGQRI EGFGLARVID SDDTNYKPGD
101: IVSGIIGWEE YSLLRSSDNL QLRNIQLDDD IPLSYHLGLL GMAGFTAYAG FNEICCPKKG DSVFVSAACG AVGQLVGQLA KLHGCYVVGS AGSKQKVEIL
201: KNELGYDEAF NYKEEADLDT ALKRYFPEGI DIYFDNVGGS MLDAALLNMK VRGRIALCGM VSLQSLSTSS QGIKNLYSAI YKRLRLEGFL QSDYLHIFPQ
301: FLENVKRYYK EGKIVYVEDI SEGLDLAPAA LVGLFSGKNI GKQVVRVAKE

Arabidopsis Description

Zinc-binding dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.