Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G396000.1 | Wheat | cytosol | 100.0 | 48.56 |
| TraesCS3D01G396200.1 | Wheat | cytosol, peroxisome, plastid | 99.01 | 28.41 |
| TraesCS3B01G434300.1 | Wheat | cytosol | 96.04 | 27.56 |
| TraesCS3A01G401400.1 | Wheat | cytosol | 94.06 | 26.99 |
| KRH46910 | Soybean | cytosol | 59.41 | 26.32 |
| HORVU3Hr1G090050.28 | Barley | plastid | 88.12 | 23.36 |
| VIT_00s0220g00130.t01 | Wine grape | cytosol | 66.34 | 19.36 |
| GSMUA_Achr10P... | Banana | cytosol | 65.35 | 19.02 |
| KRH01782 | Soybean | nucleus | 63.37 | 18.39 |
| PGSC0003DMT400060048 | Potato | cytosol | 61.39 | 17.37 |
| CDY16411 | Canola | cytosol | 59.41 | 17.14 |
| CDY60946 | Canola | cytosol | 59.41 | 17.14 |
| Bra022471.1-P | Field mustard | cytosol | 59.41 | 17.09 |
| Zm00001d042555_P001 | Maize | cytosol, plastid | 78.22 | 17.06 |
| Solyc05g055700.2.1 | Tomato | cytosol | 59.41 | 16.81 |
| AT1G65560.1 | Thale cress | cytosol | 56.44 | 16.29 |
| EES01886 | Sorghum | extracellular | 79.21 | 12.14 |
| GSMUA_Achr8P08570_001 | Banana | extracellular | 67.33 | 11.72 |
| HORVU2Hr1G115460.2 | Barley | cytosol | 6.93 | 2.78 |
| HORVU7Hr1G075560.3 | Barley | cytosol | 5.94 | 2.38 |
| HORVU3Hr1G090120.1 | Barley | mitochondrion | 1.98 | 0.85 |
Protein Annotations
| EnsemblPlants:TraesCSU01G228300.1 | EnsemblPlantsGene:TraesCSU01G228300 | Gene3D:3.90.180.10 | InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR43205 |
| PANTHER:PTHR43205:SF8 | SUPFAM:SSF50129 | SUPFAM:SSF51735 | MapMan:50.1.3 | : | : |
Description
No Description!
Coordinates
chrUn:-:338412123..338412428
Molecular Weight (calculated)
11403.1 Da
IEP (calculated)
8.851
GRAVY (calculated)
-0.063
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MRMHGRIAVC GMVSQHGMTD PSGIHNLFCL VPKRISMKGF IQSDYIKLFP QFVDYMTKHY KDGKIEYVED MSIRLENAPA AFVGLFSGKN VGKQVVCVSQ
101: E
101: E
001: MGGVQCYHLT HEHFKIQHTD VPLSYYTGLL GMPGMTAYVG FYEICSPKKG ETVYVSAASG AVGQLVGQFA KMMGCYVVGS AGSKEKVDLL KTKFGFDYAF
101: NYKEEPDLSA ALKRCFPNGI DIYFENVGGK MLDAVLMNMN MHGRIAVCGM ISQYNLENQE GVHNLSNIIY KRIRIQGFVV SDFYDEYSKF LEFLHPHIKE
201: GKITYVEDVA DGLEKGPEAL VGLFHGKNVG KQVVVIARE
101: NYKEEPDLSA ALKRCFPNGI DIYFENVGGK MLDAVLMNMN MHGRIAVCGM ISQYNLENQE GVHNLSNIIY KRIRIQGFVV SDFYDEYSKF LEFLHPHIKE
201: GKITYVEDVA DGLEKGPEAL VGLFHGKNVG KQVVVIARE
Arabidopsis Description
Zinc-binding dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4KFK3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.