Factsheet for TraesCS3D01G396200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome, plastid

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G396000.1	Wheat	cytosol	58.81	99.52
TraesCSU01G228300.1	Wheat	cytosol	28.41	99.01
TraesCS3B01G434300.1	Wheat	cytosol	97.16	97.16
TraesCS3A01G401400.1	Wheat	cytosol	96.02	96.02
HORVU3Hr1G090050.28	Barley	plastid	95.17	87.93
HORVU3Hr1G090120.1	Barley	mitochondrion	55.68	83.05
HORVU2Hr1G115460.2	Barley	cytosol	51.7	72.22
KRH46910	Soybean	cytosol	44.89	69.3
GSMUA_Achr10P...	Banana	cytosol	67.9	68.88
VIT_00s0220g00130.t01	Wine grape	cytosol	67.61	68.79
HORVU7Hr1G075560.3	Barley	cytosol	48.86	68.25
CDY16411	Canola	cytosol	65.91	66.29
CDY60946	Canola	cytosol	65.91	66.29
Bra022471.1-P	Field mustard	cytosol	65.91	66.1
KRH01782	Soybean	nucleus	64.77	65.52
Zm00001d042555_P001	Maize	cytosol, plastid	86.08	65.44
AT1G65560.1	Thale cress	cytosol	63.64	64.0
Solyc05g055700.2.1	Tomato	cytosol	64.77	63.87
PGSC0003DMT400060048	Potato	cytosol	64.2	63.31
TraesCS5D01G310600.1	Wheat	cytosol	57.67	58.5
TraesCS5D01G310500.1	Wheat	cytosol	55.68	57.14
TraesCS2D01G068900.1	Wheat	cytosol	55.97	56.94
TraesCS2D01G068700.1	Wheat	cytosol	55.68	56.48
TraesCS5D01G103800.1	Wheat	cytosol	55.4	56.2
TraesCS3D01G087400.1	Wheat	cytosol	55.4	54.78
EES01886	Sorghum	extracellular	86.93	46.43
GSMUA_Achr8P08570_001	Banana	extracellular	69.03	41.9
TraesCS7D01G348600.1	Wheat	cytosol	45.74	37.79
TraesCS5D01G246800.2	Wheat	peroxisome	28.41	15.77
TraesCS5D01G247000.2	Wheat	peroxisome	22.16	13.2

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00107	PFAM:PF16884	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF8	SMART:SM00829
SUPFAM:SSF50129	SUPFAM:SSF51735	EnsemblPlantsGene:TraesCS3D01G396200	EnsemblPlants:TraesCS3D01G396200.1	TIGR:cd08295	:

Description

No Description!

Coordinates

chr3D:-:511324653..511326764

Molecular Weight (calculated)

38542.7 Da

IEP (calculated)

6.713

GRAVY (calculated)

-0.072

Length

352 amino acids

Sequence
(BLAST)

001: MEQANPRAGS ARNRKVVLRD YISRAPREDD MALVDGGAVP LRVPEGAAGP AVLVKNLYLS CDPYMRGRMR DFHGSYIPPF KPGSVIEGLG VARVVDSTHP
101: GFVAGDIVSG MTGWEEYSLI DKPEQLNKIQ QSDIPLSYHL GLLGMPGFTA YVGFYEICSP KKGEFVFVSA ASGAVGQIVG QLAKLHGCYV VGSAGTNQKV
201: ELLKDKFGFD EAFNYKEEPD LTAALKRYFP EGIDIYFENV GGPMLDAVLL NMRMHGRIAV CGMVSQHGMT DPSGIHNLFC LVPKRISMKG FIQSDYIKLF
301: PQFVDYMTKH YKDGKIEYVE DMSIGLENAP AAFVGLFSGK NVGKQVVCVS QE

Best Arabidopsis Sequence Match ( AT1G65560.1 )
(BLAST)

001: MGEVSVVENK KVILKNYVDG IPTETDMEVK LGETIELKAP KGSSCFLVKN LYLSCDPYMR GRMRDFHGSY LPPFVPGQRI EGFGLARVID SDDTNYKPGD
101: IVSGIIGWEE YSLLRSSDNL QLRNIQLDDD IPLSYHLGLL GMAGFTAYAG FNEICCPKKG DSVFVSAACG AVGQLVGQLA KLHGCYVVGS AGSKQKVEIL
201: KNELGYDEAF NYKEEADLDT ALKRYFPEGI DIYFDNVGGS MLDAALLNMK VRGRIALCGM VSLQSLSTSS QGIKNLYSAI YKRLRLEGFL QSDYLHIFPQ
301: FLENVKRYYK EGKIVYVEDI SEGLDLAPAA LVGLFSGKNI GKQVVRVAKE

Arabidopsis Description

Zinc-binding dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.