Factsheet for TraesCS3D01G396000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G228300.1	Wheat	cytosol	48.56	100.0
KRH46910	Soybean	cytosol	68.27	62.28
TraesCS3D01G396200.1	Wheat	cytosol, peroxisome, plastid	99.52	58.81
TraesCS3B01G434300.1	Wheat	cytosol	96.63	57.1
TraesCS3A01G401400.1	Wheat	cytosol	95.19	56.25
HORVU3Hr1G090050.28	Barley	plastid	93.27	50.92
VIT_00s0220g00130.t01	Wine grape	cytosol	75.0	45.09
GSMUA_Achr10P...	Banana	cytosol	75.0	44.96
KRH01782	Soybean	nucleus	72.6	43.39
CDY60946	Canola	cytosol	72.6	43.14
Bra022471.1-P	Field mustard	cytosol	72.6	43.02
CDY16411	Canola	cytosol	72.12	42.86
PGSC0003DMT400060048	Potato	cytosol	70.19	40.9
AT1G65560.1	Thale cress	cytosol	68.75	40.86
Solyc05g055700.2.1	Tomato	cytosol	69.23	40.34
Zm00001d042555_P001	Maize	cytosol, plastid	87.5	39.31
TraesCS5D01G310600.1	Wheat	cytosol	65.38	39.19
TraesCS5D01G310500.1	Wheat	cytosol	63.46	38.48
TraesCS5D01G103800.1	Wheat	cytosol	61.54	36.89
TraesCS2D01G068900.1	Wheat	cytosol	61.06	36.71
TraesCS2D01G068700.1	Wheat	cytosol	60.58	36.31
TraesCS3D01G087400.1	Wheat	cytosol	62.02	36.24
HORVU3Hr1G090120.1	Barley	mitochondrion	40.38	35.59
EES01886	Sorghum	extracellular	88.94	28.07
GSMUA_Achr8P08570_001	Banana	extracellular	75.96	27.24
TraesCS7D01G348600.1	Wheat	cytosol	54.33	26.53
HORVU2Hr1G115460.2	Barley	cytosol	31.73	26.19
HORVU7Hr1G075560.3	Barley	cytosol	28.85	23.81
TraesCS5D01G246800.2	Wheat	peroxisome	33.65	11.04
TraesCS5D01G247000.2	Wheat	peroxisome	23.08	8.12

Protein Annotations

EnsemblPlants:TraesCS3D01G396000.1	EnsemblPlantsGene:TraesCS3D01G396000	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:GO:0008150	GO:GO:0008152
GO:GO:0055114	InterPro:ADH_C	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43205	PANTHER:PTHR43205:SF8	PFAM:PF00107
SUPFAM:SSF51735	MapMan:50.1.3	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:511299344..511301598

Molecular Weight (calculated)

22996.0 Da

IEP (calculated)

7.014

GRAVY (calculated)

0.022

Length

208 amino acids

Sequence
(BLAST)

001: MPGFTAYVGF YEICSPKKGE FVFVSAASGA VGQIVGQLAK LHGCYVVGSA GTNQKVELLK DKFGFDEAFN YKEEPDLTAA LKRYFPEGID IYFENVGGPM
101: LDAVLLNMRM HGRIAVCGMV SQHGMTDPSG IHNLFCLVPK RISMKGFIQS DYIKLFPQFV DYMTKHYKDG KIEYVEDMSI RLENAPAAFV GLFSGKNVGK
201: QVVCVSQE

Best Arabidopsis Sequence Match ( AT3G03080.1 )
(BLAST)

001: MATSGNATVA NKQVILRDYV TGFPKESDLI FTDSTIDLKI PEGSKTVLVK NLYLSCDPYM RIRMGKPDPG TAALAPHYIP GEPIYGFSVS KVIDSGHPDY
101: KKGDLLWGLV GWGEYSLITP DFSHYKIQHT DVPLSYYTGL LGMPGMTAYA GFYEICSPKK GETVFVSAAS GAVGQLVGQF AKIMGCYVVG SAGSNEKVDL
201: LKNKFGFDDA FNYKAEPDLN AALKRCFPEG IDIYFENVGG KMLDAVLLNM KLHGRIAVCG MISQYNLEDQ EGVHNLANVI YKRIRIKGFV VSDYFDKHLK
301: FLDFVLPYIR EGKITYVEDV VEGLENGPSA LLGLFHGKNV GKQLIAVARE

Arabidopsis Description

Putative NADP-dependent oxidoreductase [Source:UniProtKB/TrEMBL;Acc:Q9M9M7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.