Factsheet for TraesCS5D01G246800.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G240300.1	Wheat	nucleus	99.05	99.05
TraesCS5B01G238400.1	Wheat	peroxisome	99.05	99.05
Os09t0459800-01	Rice	nucleus, plasma membrane	86.28	86.28
EER96863	Sorghum	peroxisome	85.96	85.96
Zm00001d020727_P016	Maize	mitochondrion	85.33	85.33
TraesCS5D01G247000.2	Wheat	peroxisome	76.03	81.56
OQU89618	Sorghum	peroxisome	80.13	79.25
KRH50260	Soybean	extracellular	24.13	73.56
Zm00001d020728_P005	Maize	cytosol, peroxisome, plasma membrane	75.87	73.55
GSMUA_Achr6P04320_001	Banana	cytosol	71.92	72.04
KRH71155	Soybean	nucleus	70.19	70.3
VIT_03s0063g00610.t01	Wine grape	peroxisome	70.19	70.19
CDY16520	Canola	cytosol, peroxisome, plastid	68.3	68.84
CDY32846	Canola	cytosol, peroxisome, plastid	67.03	67.57
Bra018802.1-P	Field mustard	cytosol, peroxisome, plastid	66.88	67.41
CDY51039	Canola	cytosol, peroxisome, plastid	66.88	67.3
CDY28090	Canola	cytosol, peroxisome, plastid	66.88	67.3
Solyc01g108150.2.1	Tomato	nucleus	66.88	66.88
Bra014212.1-P	Field mustard	cytosol, peroxisome, plastid	68.45	66.77
PGSC0003DMT400066606	Potato	cytosol, endoplasmic reticulum, vacuole	66.72	66.72
AT1G49670.2	Thale cress	peroxisome	65.46	63.65
KRG88432	Soybean	cytosol	25.08	62.6
OQU87352	Sorghum	cytosol	12.93	46.59
TraesCS3D01G396000.1	Wheat	cytosol	11.04	33.65
TraesCS5D01G103800.1	Wheat	cytosol	16.4	29.97
TraesCS5D01G310500.1	Wheat	cytosol	15.93	29.45
TraesCS5D01G310600.1	Wheat	cytosol	16.09	29.39
TraesCS3D01G396200.1	Wheat	cytosol, peroxisome, plastid	15.77	28.41
TraesCS2D01G068700.1	Wheat	cytosol	15.46	28.24
TraesCS3D01G087400.1	Wheat	cytosol	15.46	27.53
TraesCS2D01G068900.1	Wheat	cytosol	14.83	27.17
TraesCS7D01G348600.1	Wheat	cytosol	15.14	22.54

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	InterPro:ADH_N	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PFAM:PF00107
PFAM:PF08240	InterPro:PKS_ER	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	ScanProsite:PS01162
PANTHER:PTHR43677	PANTHER:PTHR43677:SF3	InterPro:Quin_OxRdtase/zeta-crystal_CS	InterPro:SDR_fam	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	EnsemblPlantsGene:TraesCS5D01G246800	EnsemblPlants:TraesCS5D01G246800.2	TIGR:cd08250	:

Description

No Description!

Coordinates

chr5D:+:354694263..354705866

Molecular Weight (calculated)

68470.2 Da

IEP (calculated)

9.071

GRAVY (calculated)

0.086

Length

634 amino acids

Sequence
(BLAST)

001: MELKPGMSAL VTGGASGIGK ALCIAFAQKG LFVTVVDFSE QNGREVTSLV QKENKKFHGD VGVPSAIFVK CDVSIEGDLA AAFAKHVDTY GGLDICINCA
101: GIANKTLVYD DISDGTRTWR HAINVNFVAV IDGTRIASQI MRSRKKPGVI INIGSAAGLY PMFADPIYTG TKGGVVMFTR SLAPLKRHGV RVNVLCPEFV
201: QTNMAEQINQ KIVHATGGFL KMEEVVNGAF ELIKDESKAG ACLWITKRRG MEYWPSAEEQ RKYLLNYTKS KRTVTKNVFP SIQTPEFYEK IVVHTLSHNF
301: RNATRIDRVR LRLPIEPQSA LVKIIYAGVN ASDVNFSSGR YFSGSAKETA ARLPFDAGFE AVGIVASVGD AVSHVKVGSP VALMTFGSYA EFTMVPAKHL
401: LPVPRPDPEV VAMLTSGLTA SISLEKAGQM TSGQVVLVTA AAGGTGQFAV QLAKLAGNKV VATCGGESKA AFLASLGVDR VINYQHEKIK DVLEKEFPKG
501: VDIIYESVGG DMFDLCLNAL AVHGRLIVIG MISQYQGEEG WKPKNYTGLC EKILAKSQTV AGFFLVQHAH MWQDHLDKLF ELYASGKLKV SLDPKKFLGV
601: ASAVDAVEYL HSGKSVGKVV VCIDPAYSQT LAKL

Best Arabidopsis Sequence Match ( AT1G49670.1 )
(BLAST)

001: MEIKPGLSAL VTGGASGIGR ALCLALAEKG VFVTVADFSE EKGQETTSLV REANAKFHQG LSFPSAIFVK CDVTNRGDLL AAFDKHLATF GTLDICINNA
101: GISTPLRFDK DDTDGSKSWK HTINVDLIAV VEGTQLAIKA MKAKQKPGVI INMGSAAGLY PMPVDPIYAA SKAGVVLFTR SLAYYRRQGI RINVLCPEFI
201: KTDLAEAIDA SILESIGGYM SMDMLIKGAF ELITDEKKAG ACLWITKRRG LEYWPTPMEE TKYLVGSSSR KRPSFKVSTK IEFPQSFEKM IVHTLSHKFR
301: SATRIVRAPL QLPIGPHQVL LKIIYAGVNA SDVNFSSGRY FTGGSPKLPF DAGFEGVGLI AAVGESVKNL EVGTPAAVMT FGAYSEYMIV SSKHVLPVPR
401: PDPEVVAMLT SGLTALIALE KAGQMKSGET VLVTAAAGGT GQFAVQLAKL SGNKVIATCG GSEKAKLLKE LGVDRVIDYK SENIKTVLKK EFPKGVNIIY
501: ESVGGQMFDM CLNALAVYGR LIVIGMISQY QGEKGWEPAK YPGLCEKILA KSQTVAGFFL VQYSQLWKQN LDKLFNLYAL GKLKVGIDQK KFIGLNAVAD
601: AVEYLHSGKS TGKVVVCIDP AFEQKTSRL

Arabidopsis Description

NQRARP protein (REF) [Source:TAIR;Acc:AT1G49670]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.