Factsheet for Zm00001d020727_P016

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, peroxisome, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96863	Sorghum	peroxisome	96.06	96.06
TraesCS5B01G238400.1	Wheat	peroxisome	86.12	86.12
TraesCS5A01G240300.1	Wheat	nucleus	85.8	85.8
TraesCS5D01G246800.2	Wheat	peroxisome	85.33	85.33
Os09t0459800-01	Rice	nucleus, plasma membrane	84.54	84.54
TraesCS5A01G240400.1	Wheat	peroxisome	78.39	78.39
TraesCS5D01G247000.2	Wheat	peroxisome	72.87	78.17
TraesCS5B01G238500.1	Wheat	peroxisome	77.92	77.92
HORVU5Hr1G068630.9	Barley	plastid	78.08	75.8
KRH50260	Soybean	extracellular	24.13	73.56
Zm00001d020728_P005	Maize	cytosol, peroxisome, plasma membrane	75.24	72.94
GSMUA_Achr6P04320_001	Banana	cytosol	70.66	70.77
VIT_03s0063g00610.t01	Wine grape	peroxisome	70.19	70.19
KRH71155	Soybean	nucleus	69.72	69.83
CDY16520	Canola	cytosol, peroxisome, plastid	67.98	68.52
CDY32846	Canola	cytosol, peroxisome, plastid	67.35	67.89
Solyc01g108150.2.1	Tomato	nucleus	67.67	67.67
PGSC0003DMT400066606	Potato	cytosol, endoplasmic reticulum, vacuole	67.51	67.51
Bra018802.1-P	Field mustard	cytosol, peroxisome, plastid	66.88	67.41
CDY51039	Canola	cytosol, peroxisome, plastid	66.88	67.3
CDY28090	Canola	cytosol, peroxisome, plastid	66.72	67.14
Bra014212.1-P	Field mustard	cytosol, peroxisome, plastid	67.98	66.31
AT1G49670.2	Thale cress	peroxisome	64.98	63.19
KRG88432	Soybean	cytosol	23.82	59.45
Zm00001d049031_P001	Maize	peroxisome	12.3	31.2
Zm00001d049032_P001	Maize	cytosol	17.35	30.64
Zm00001d023990_P001	Maize	cytosol	16.25	29.86
Zm00001d007285_P002	Maize	peroxisome	16.4	29.38
Zm00001d046491_P001	Maize	cytosol, peroxisome, plastid	15.77	29.07
Zm00001d008377_P001	Maize	extracellular, mitochondrion	16.4	29.05
Zm00001d046490_P001	Maize	cytosol, peroxisome, plastid	15.77	28.09
Zm00001d042555_P001	Maize	cytosol, plastid	16.25	22.25

Protein Annotations

EntrezGene:100381485	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	UniProt:A0A1D6I5W8	InterPro:ADH_C
InterPro:ADH_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM55490.1
ProteinID:ONM55491.1	PFAM:PF00106	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	PRINTS:PR00080
PRINTS:PR00081	ScanProsite:PS00061	ScanProsite:PS01162	PANTHER:PTHR43677	PANTHER:PTHR43677:SF3	InterPro:Quin_OxRdtase/zeta-crystal_CS
InterPro:SDR_fam	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI0002219019
EnsemblPlantsGene:Zm00001d020727	EnsemblPlants:Zm00001d020727_P016	EnsemblPlants:Zm00001d020727_T016	:	:	:

Description

ARP protein (REF)

Coordinates

chr7:+:130345827..130357946

Molecular Weight (calculated)

68990.6 Da

IEP (calculated)

8.780

GRAVY (calculated)

0.021

Length

634 amino acids

Sequence
(BLAST)

001: MELKPGMSAL VTGGASGIGK ALCIAFARRG LFVTVVDFSE ENGREVATLV QKENSKFHGD LRIPSSIFVK CDVSNADNLA ACFEKHVQTY NGLDICINCA
101: GIANKTLVYD DTSDGTRTWR HAVNVNLVAV IDGTRIASQI MRNQKKPGVI INIGSAAGLY PMFLDPVYSA AKGGVVMFTR SLSPLKRHGV RVNVLCPEFV
201: QTNMAEQMSR KVIDSSGGYL EMEDVVNGTF ELIQDESKAG ACLWITKRRG MEYWPTPEEQ RKYMVNPNKS KRMLTNNIYP SIRMPEFFEK IVVHTLSHNF
301: RNATRLERVQ LRFPIKAHSA LVKIIYAGVN ASDVNFSSGR YFSGNPKETA SRLPFDAGFE GVGIVAAVGD SVSHIKVGTP VALMTFGSYA EFTEVPAKHL
401: LPVPRPDPEV VAMLTSGLTA SISLEKAGQM TSGQVVLVTA AAGGTGQFAV QLAKLAGNKV VATCGGESKA ELLASLGVDR VINYRNERVK DVLKKEFPRG
501: VDIIYESVGG EMFDLCLNAL AVHGHLIVIG MISQYQGEDG WKPKNYTGLC EKILAKSQTV AGFFLVQYAH LWQDHLNKLF DLYASGKLKV SLDPKQFLGV
601: ASVVDAVEYL HSGKSVGKVV VCIDPSYGQI VAKL

Best Arabidopsis Sequence Match ( AT1G49670.1 )
(BLAST)

001: MEIKPGLSAL VTGGASGIGR ALCLALAEKG VFVTVADFSE EKGQETTSLV REANAKFHQG LSFPSAIFVK CDVTNRGDLL AAFDKHLATF GTLDICINNA
101: GISTPLRFDK DDTDGSKSWK HTINVDLIAV VEGTQLAIKA MKAKQKPGVI INMGSAAGLY PMPVDPIYAA SKAGVVLFTR SLAYYRRQGI RINVLCPEFI
201: KTDLAEAIDA SILESIGGYM SMDMLIKGAF ELITDEKKAG ACLWITKRRG LEYWPTPMEE TKYLVGSSSR KRPSFKVSTK IEFPQSFEKM IVHTLSHKFR
301: SATRIVRAPL QLPIGPHQVL LKIIYAGVNA SDVNFSSGRY FTGGSPKLPF DAGFEGVGLI AAVGESVKNL EVGTPAAVMT FGAYSEYMIV SSKHVLPVPR
401: PDPEVVAMLT SGLTALIALE KAGQMKSGET VLVTAAAGGT GQFAVQLAKL SGNKVIATCG GSEKAKLLKE LGVDRVIDYK SENIKTVLKK EFPKGVNIIY
501: ESVGGQMFDM CLNALAVYGR LIVIGMISQY QGEKGWEPAK YPGLCEKILA KSQTVAGFFL VQYSQLWKQN LDKLFNLYAL GKLKVGIDQK KFIGLNAVAD
601: AVEYLHSGKS TGKVVVCIDP AFEQKTSRL

Arabidopsis Description

NQRARP protein (REF) [Source:TAIR;Acc:AT1G49670]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.