Factsheet for TraesCS5A01G240400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G238500.1	Wheat	peroxisome	97.16	97.16
TraesCS5D01G247000.2	Wheat	peroxisome	90.54	97.12
HORVU5Hr1G068630.9	Barley	plastid	96.21	93.42
OQU89618	Sorghum	peroxisome	81.86	80.97
TraesCS5A01G240300.1	Wheat	nucleus	80.91	80.91
Os09t0459800-01	Rice	nucleus, plasma membrane	80.6	80.6
EER96863	Sorghum	peroxisome	79.5	79.5
Zm00001d020727_P016	Maize	mitochondrion	78.39	78.39
Zm00001d020728_P005	Maize	cytosol, peroxisome, plasma membrane	75.71	73.39
GSMUA_Achr6P04320_001	Banana	cytosol	68.45	68.56
KRH50260	Soybean	extracellular	22.24	67.79
VIT_03s0063g00610.t01	Wine grape	peroxisome	67.03	67.03
Solyc01g108150.2.1	Tomato	nucleus	65.46	65.46
PGSC0003DMT400066606	Potato	cytosol, endoplasmic reticulum, vacuole	65.3	65.3
KRH71155	Soybean	nucleus	64.83	64.93
CDY16520	Canola	cytosol, peroxisome, plastid	64.35	64.86
CDY28090	Canola	cytosol, peroxisome, plastid	64.04	64.44
CDY32846	Canola	cytosol, peroxisome, plastid	63.88	64.39
CDY51039	Canola	cytosol, peroxisome, plastid	63.72	64.13
Bra018802.1-P	Field mustard	cytosol, peroxisome, plastid	63.41	63.91
Bra014212.1-P	Field mustard	cytosol, peroxisome, plastid	64.51	62.92
AT1G49670.2	Thale cress	peroxisome	61.83	60.12
KRG88432	Soybean	cytosol	22.24	55.51
OQU87352	Sorghum	cytosol	13.25	47.73
TraesCS5A01G303300.1	Wheat	cytosol	13.88	30.88
TraesCS5A01G091700.1	Wheat	cytosol	15.93	29.28
TraesCS5A01G303400.1	Wheat	cytosol	15.93	29.19
TraesCS2A01G069900.1	Wheat	peroxisome	15.3	28.2
TraesCS3A01G401400.1	Wheat	cytosol	15.46	27.84
TraesCS4A01G229900.1	Wheat	cytosol	15.14	27.35
TraesCS3A01G087300.1	Wheat	cytosol	14.83	26.63
TraesCS2A01G070000.1	Wheat	cytosol	14.51	26.59
TraesCS7A01G374800.1	Wheat	cytosol	14.2	26.32

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	InterPro:ADH_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491
GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	ScanProsite:PS01162	PANTHER:PTHR43677
PANTHER:PTHR43677:SF3	InterPro:Quin_OxRdtase/zeta-crystal_CS	InterPro:SDR_fam	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
InterPro:Sc_DH/Rdtase_CS	EnsemblPlantsGene:TraesCS5A01G240400	EnsemblPlants:TraesCS5A01G240400.1	TIGR:cd05323	TIGR:cd08250	:

Description

No Description!

Coordinates

chr5A:+:456612473..456623562

Molecular Weight (calculated)

68305.2 Da

IEP (calculated)

9.443

GRAVY (calculated)

0.102

Length

634 amino acids

Sequence
(BLAST)

001: MKLEPGMSAL VTGGGSGIGK ALCIALAHKG LFVTVVDFSE EHGGQVASFV QKGSSQIHGD SKVPSAMFIK CDVTDADALA AAFGKHVNLY GGLDVCINCA
101: GFVNKSLVYD DTSNGTKTWR RAVNVNLVAV IDGTRIATQM MRAQKKPGAI INIGSVAGLY PMHYEPIYSG TKGGVIMFTR SLAPLKRHGI RVNVICPEFV
201: QTNMGEQVNR VLVDALGGFL KMEDVINGAF ELIEDESKAG ACLWISKRRG MVYWPTSEEE KKYLVYATKS KMTVTKNRFP SIQTPEFFEK ITVHTLSHNF
301: RNATRIDRVR LRLPMEPHSA LVKIIYAGVN ASDVNFTSGR YFSGNAKEAS AHLPFDAGFE AVGIVASVGD SVRHIKVGTA VALMTFGGYA EFTVVPAKHL
401: LLVPRPDPEV VAMLTSGLTA SISLEKSGQM TSGQVILVTA AAGGTGQFAV QLAKLAGNKV IATCGGGNKA ALLASLGVDR VINYQHEKIK DVLKKEFPRG
501: ADIVYESVGA EMFDLCLNAL AVRGRLIVIG MISQYQGKDG WMPRNYYGLC EKILGKSQTV AGFFLIQYAD LWQKHLDKLF DLHASGKLKV SLDPKKFVGV
601: ASVADAVEHL HSGRSVGKVV VCMDPAYSQT LAKL

Best Arabidopsis Sequence Match ( AT1G49670.1 )
(BLAST)

001: MEIKPGLSAL VTGGASGIGR ALCLALAEKG VFVTVADFSE EKGQETTSLV REANAKFHQG LSFPSAIFVK CDVTNRGDLL AAFDKHLATF GTLDICINNA
101: GISTPLRFDK DDTDGSKSWK HTINVDLIAV VEGTQLAIKA MKAKQKPGVI INMGSAAGLY PMPVDPIYAA SKAGVVLFTR SLAYYRRQGI RINVLCPEFI
201: KTDLAEAIDA SILESIGGYM SMDMLIKGAF ELITDEKKAG ACLWITKRRG LEYWPTPMEE TKYLVGSSSR KRPSFKVSTK IEFPQSFEKM IVHTLSHKFR
301: SATRIVRAPL QLPIGPHQVL LKIIYAGVNA SDVNFSSGRY FTGGSPKLPF DAGFEGVGLI AAVGESVKNL EVGTPAAVMT FGAYSEYMIV SSKHVLPVPR
401: PDPEVVAMLT SGLTALIALE KAGQMKSGET VLVTAAAGGT GQFAVQLAKL SGNKVIATCG GSEKAKLLKE LGVDRVIDYK SENIKTVLKK EFPKGVNIIY
501: ESVGGQMFDM CLNALAVYGR LIVIGMISQY QGEKGWEPAK YPGLCEKILA KSQTVAGFFL VQYSQLWKQN LDKLFNLYAL GKLKVGIDQK KFIGLNAVAD
601: AVEYLHSGKS TGKVVVCIDP AFEQKTSRL

Arabidopsis Description

NQRARP protein (REF) [Source:TAIR;Acc:AT1G49670]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.