Factsheet for TraesCS5B01G238500.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G240400.1	Wheat	peroxisome	97.16	97.16
TraesCS5D01G247000.2	Wheat	peroxisome	90.54	97.12
HORVU5Hr1G068630.9	Barley	plastid	95.58	92.8
TraesCS5B01G238400.1	Wheat	peroxisome	80.6	80.6
OQU89618	Sorghum	peroxisome	81.39	80.5
Os09t0459800-01	Rice	nucleus, plasma membrane	80.28	80.28
EER96863	Sorghum	peroxisome	79.02	79.02
Zm00001d020727_P016	Maize	mitochondrion	77.92	77.92
Zm00001d020728_P005	Maize	cytosol, peroxisome, plasma membrane	75.24	72.94
GSMUA_Achr6P04320_001	Banana	cytosol	68.14	68.25
KRH50260	Soybean	extracellular	22.08	67.31
VIT_03s0063g00610.t01	Wine grape	peroxisome	66.09	66.09
PGSC0003DMT400066606	Potato	cytosol, endoplasmic reticulum, vacuole	64.83	64.83
Solyc01g108150.2.1	Tomato	nucleus	64.83	64.83
CDY16520	Canola	cytosol, peroxisome, plastid	64.04	64.55
KRH71155	Soybean	nucleus	64.35	64.45
CDY32846	Canola	cytosol, peroxisome, plastid	63.56	64.07
CDY28090	Canola	cytosol, peroxisome, plastid	63.56	63.97
CDY51039	Canola	cytosol, peroxisome, plastid	63.41	63.81
Bra018802.1-P	Field mustard	cytosol, peroxisome, plastid	63.09	63.59
Bra014212.1-P	Field mustard	cytosol, peroxisome, plastid	64.2	62.62
AT1G49670.2	Thale cress	peroxisome	61.67	59.97
KRG88432	Soybean	cytosol	22.08	55.12
OQU87352	Sorghum	cytosol	13.09	47.16
TraesCS5B01G097900.1	Wheat	cytosol	16.88	30.84
TraesCS5B01G303800.1	Wheat	cytosol	15.62	28.86
TraesCS4B01G086100.1	Wheat	cytosol	16.09	28.41
TraesCS2B01G083300.1	Wheat	cytosol	14.98	27.54
TraesCS7B01G252600.1	Wheat	cytosol	14.83	27.49
TraesCS3B01G434300.1	Wheat	cytosol	14.98	26.99
TraesCS2B01G083600.2	Wheat	cytosol	14.35	26.22
TraesCS3B01G102600.1	Wheat	cytosol	14.2	25.42
TraesCS5B01G303700.1	Wheat	golgi	15.46	24.02

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	InterPro:ADH_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491
GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	ScanProsite:PS01162	PANTHER:PTHR43677
PANTHER:PTHR43677:SF3	InterPro:Quin_OxRdtase/zeta-crystal_CS	InterPro:SDR_fam	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
InterPro:Sc_DH/Rdtase_CS	EnsemblPlantsGene:TraesCS5B01G238500	EnsemblPlants:TraesCS5B01G238500.1	TIGR:cd08250	:	:

Description

No Description!

Coordinates

chr5B:+:419478635..419497978

Molecular Weight (calculated)

68437.4 Da

IEP (calculated)

9.461

GRAVY (calculated)

0.098

Length

634 amino acids

Sequence
(BLAST)

001: MKLEPGMSAL VTGGGSGIGK ALCIALAHKG LSVTVVDFSE EHGEQAASLV QKRRNQIHGD SKVPSAIFIK CDVTDADALP AAFGKHVNLY GGLDVCINCA
101: GFVNKSLVYD DTSNGTKTWR RAVNVNLVAV IDGTRIATQI MRAQKKPGAI INIGSVAGLF PMHYEPIYSG TKGGVIMFTR SLAPLKRHGI RVNVICPEFV
201: QTNMGEQVNR VLVDALGGFL KMEDVINGAF ELIEDESKAG ACLWISKRRG MVYWPTSEEE KKYLVYATKS KMTLIKNRFP SIQTPEFFEK ITVHTLSHNF
301: RNATRIDRVR LRLPMEPHSA LIKIIYAGVN ASDVNFTSGR YFSGNAKEAS AHLPFDAGFE AVGIVASVGD AVRHIKVGTA VALMTFGSYA EFTVVPAKHL
401: LLVPRPDPEV VAMLTSGLTA SISLEKSGQM TSGQVVLVTA AAGGTGQFAV QLAKLAGNKV IATCGGGNKA ALLASLGVDR VINYQHEKIK DVLKKEFPRG
501: ADIVYESVGA EMFDLCLNAL AVRGRLIVIG MISQYQGKDG WMPRNYYGLC EKILGKSQTV AGFFLIQYAD LWQKHLDKLF DLHASGTLKV SLDPKKFVGV
601: ASVADAVEHL HSGRSVGKVV VCMDPAYSQT LAKL

Best Arabidopsis Sequence Match ( AT1G49670.1 )
(BLAST)

001: MEIKPGLSAL VTGGASGIGR ALCLALAEKG VFVTVADFSE EKGQETTSLV REANAKFHQG LSFPSAIFVK CDVTNRGDLL AAFDKHLATF GTLDICINNA
101: GISTPLRFDK DDTDGSKSWK HTINVDLIAV VEGTQLAIKA MKAKQKPGVI INMGSAAGLY PMPVDPIYAA SKAGVVLFTR SLAYYRRQGI RINVLCPEFI
201: KTDLAEAIDA SILESIGGYM SMDMLIKGAF ELITDEKKAG ACLWITKRRG LEYWPTPMEE TKYLVGSSSR KRPSFKVSTK IEFPQSFEKM IVHTLSHKFR
301: SATRIVRAPL QLPIGPHQVL LKIIYAGVNA SDVNFSSGRY FTGGSPKLPF DAGFEGVGLI AAVGESVKNL EVGTPAAVMT FGAYSEYMIV SSKHVLPVPR
401: PDPEVVAMLT SGLTALIALE KAGQMKSGET VLVTAAAGGT GQFAVQLAKL SGNKVIATCG GSEKAKLLKE LGVDRVIDYK SENIKTVLKK EFPKGVNIIY
501: ESVGGQMFDM CLNALAVYGR LIVIGMISQY QGEKGWEPAK YPGLCEKILA KSQTVAGFFL VQYSQLWKQN LDKLFNLYAL GKLKVGIDQK KFIGLNAVAD
601: AVEYLHSGKS TGKVVVCIDP AFEQKTSRL

Arabidopsis Description

NQRARP protein (REF) [Source:TAIR;Acc:AT1G49670]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.