Factsheet for Zm00001d008377_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02675	Sorghum	cytosol, mitochondrion, peroxisome	93.58	93.06
TraesCS3D01G087400.1	Wheat	cytosol	74.58	75.0
TraesCS3A01G087300.1	Wheat	cytosol	73.74	74.79
TraesCS3B01G102600.1	Wheat	cytosol	71.23	72.03
HORVU3Hr1G015680.3	Barley	cytosol, peroxisome	71.23	70.64
GSMUA_Achr5P17090_001	Banana	cytosol	67.32	69.86
HORVU3Hr1G015640.7	Barley	cytosol, mitochondrion, peroxisome	70.67	67.83
PGSC0003DMT400071464	Potato	cytosol	14.53	62.65
Zm00001d007285_P002	Maize	peroxisome	55.03	55.65
Zm00001d023990_P001	Maize	cytosol	53.07	55.07
Zm00001d049032_P001	Maize	cytosol	53.91	53.76
Solyc11g030720.1.1	Tomato	cytoskeleton, cytosol, peroxisome	50.84	52.91
Zm00001d049031_P001	Maize	peroxisome	35.47	50.8
Zm00001d046491_P001	Maize	cytosol, peroxisome, plastid	45.53	47.38
Zm00001d046490_P001	Maize	cytosol, peroxisome, plastid	46.09	46.35
Zm00001d042555_P001	Maize	cytosol, plastid	57.82	44.71
AT5G37960.1	Thale cress	cytosol	12.85	42.59
Zm00001d020727_P016	Maize	mitochondrion	29.05	16.4
Zm00001d020728_P005	Maize	cytosol, peroxisome, plasma membrane	26.26	14.37

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	ProteinID:AQK89688.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf
UniProt:K7UXK5	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF16884	InterPro:PKS_ER	PANTHER:PTHR43205
PANTHER:PTHR43205:SF18	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI00018C65C0	EnsemblPlantsGene:Zm00001d008377
EnsemblPlants:Zm00001d008377_P001	EnsemblPlants:Zm00001d008377_T001	:	:	:	:

Description

Putative alcohol dehydrogenase superfamily protein

Coordinates

chr8:+:6768030..6769106

Molecular Weight (calculated)

38937.8 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.056

Length

358 amino acids

Sequence
(BLAST)

001: MATTATNRRV ILKEYVEGYP REEHMELLQG AEVPLRLTGA EPAGSVLVRN LYLSCDPYMR PKMSRPLRES YTAAFVPGDT ITGYGVARVV DSSDPRLAPG
101: DLVWGITGWE DYSVVTPPAT RLLSKISHHG VGEGAGVPLS YYTGILGMPG LTAYVGFHEI CAPKKGETVF VSAASGAVGQ LVGQFARLAG CHVVGSAGSR
201: EKVELLKTRF GFHDAFNYKE EPDLGAALKR CFPDGIDIYF ENVGGAMLDA VLLNMRVHGR IAVCGLISQY NLADGEKDAV RNLAAVISKR LRLQGFIEPD
301: HKHLYPQYEA WVLPYIRDGT LAYVEDVAEG LESAPKALIG LFHGRNVGKQ LVRVADDE

Best Arabidopsis Sequence Match ( AT5G16970.1 )
(BLAST)

001: MTATNKQVIL KDYVSGFPTE SDFDFTTTTV ELRVPEGTNS VLVKNLYLSC DPYMRIRMGK PDPSTAALAQ AYTPGQPIQG YGVSRIIESG HPDYKKGDLL
101: WGIVAWEEYS VITPMTHAHF KIQHTDVPLS YYTGLLGMPG MTAYAGFYEV CSPKEGETVY VSAASGAVGQ LVGQLAKMMG CYVVGSAGSK EKVDLLKTKF
201: GFDDAFNYKE ESDLTAALKR CFPNGIDIYF ENVGGKMLDA VLVNMNMHGR IAVCGMISQY NLENQEGVHN LSNIIYKRIR IQGFVVSDFY DKYSKFLEFV
301: LPHIREGKIT YVEDVADGLE KAPEALVGLF HGKNVGKQVV VVARE

Arabidopsis Description

AERNADPH-dependent oxidoreductase 2-alkenal reductase [Source:UniProtKB/Swiss-Prot;Acc:Q39172]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.