CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049031_P001	Maize	peroxisome	60.51	85.2
OQU83135	Sorghum	cytosol	84.94	84.94
KXG28081	Sorghum	peroxisome	83.52	82.82
TraesCS4A01G229900.1	Wheat	cytosol	73.3	73.5
TraesCS4B01G086100.1	Wheat	cytosol	73.58	72.14
Os11t0255500-01	Rice	cytosol	68.47	67.13
EES16901	Sorghum	cytosol	64.2	64.02
GSMUA_Achr5P17110_001	Banana	cytosol	43.47	63.22
KXG23283	Sorghum	cytosol	49.15	61.57
VIT_05s0094g01130.t01	Wine grape	cytosol	58.81	60.53
VIT_05s0094g01120.t01	Wine grape	cytosol	58.81	60.0
Solyc12g096760.1.1	Tomato	extracellular	58.24	59.77
VIT_05s0094g01160.t01	Wine grape	cytosol	58.52	59.71
CDY43153	Canola	cytosol	58.24	59.59
Bra032019.1-P	Field mustard	cytosol	56.82	59.52
AT3G03080.1	Thale cress	cytosol	58.81	59.14
AT5G16960.2	Thale cress	cytosol	57.95	58.96
VIT_05s0094g01140.t01	Wine grape	cytosol	57.1	58.77
CDY38077	Canola	cytosol	58.24	58.57
CDY28735	Canola	cytosol	57.39	58.55
CDX69408	Canola	cytosol	56.82	58.14
VIT_05s0094g01150.t01	Wine grape	cytosol	56.82	58.14
Bra008581.1-P	Field mustard	cytosol	56.82	58.14
CDX85479	Canola	cytosol	57.67	58.0
Solyc12g010960.1.1	Tomato	cytosol	24.72	57.62
AT5G37980.1	Thale cress	plastid	57.67	57.51
Solyc01g080030.1.1	Tomato	cytosol	43.47	57.3
Solyc03g007200.1.1	Tomato	cytosol	50.85	57.19
AT5G16990.1	Thale cress	cytosol	55.68	57.14
Solyc06g063040.1.1	Tomato	extracellular, plastid	55.68	57.14
AT1G26320.1	Thale cress	cytosol	56.53	56.7
CDY16966	Canola	cytosol	56.53	56.7
AT5G37940.1	Thale cress	cytosol, peroxisome, plastid	56.82	56.66
Bra023591.1-P	Field mustard	cytosol	56.25	56.57
VIT_05s0094g01260.t01	Wine grape	cytosol	54.83	56.43
AT5G38000.1	Thale cress	plastid	56.53	56.37
CDY16150	Canola	cytosol	55.97	56.13
Bra024723.1-P	Field mustard	cytosol	55.97	56.13
AT5G16970.1	Thale cress	cytosol	54.83	55.94
AT5G17000.1	Thale cress	cytosol	54.83	55.94
CDX85014	Canola	cytosol	55.68	55.84
CDX78721	Canola	cytosol	55.97	55.49
VIT_05s0094g01230.t01	Wine grape	cytosol	43.47	55.43
Solyc12g010950.1.1	Tomato	cytosol	54.26	55.2
VIT_05s0094g01250.t01	Wine grape	cytosol	43.75	55.2
AT5G16980.2	Thale cress	cytosol	46.59	53.77
AT3G59845.1	Thale cress	cytosol, golgi, peroxisome	52.56	53.47
EES02675	Sorghum	cytosol, mitochondrion, peroxisome	54.55	53.33
Solyc12g010970.1.1	Tomato	cytosol	30.11	52.48
Bra007482.1-P	Field mustard	cytosol	50.0	49.86
CDY05974	Canola	cytosol	49.72	49.58
EER90008	Sorghum	cytosol	45.45	46.24
Bra006381.1-P	Field mustard	cytosol	56.25	45.73
CDX70729	Canola	golgi, plastid	55.97	41.65
EES01886	Sorghum	extracellular	54.83	29.29
OQU87352	Sorghum	cytosol	9.38	18.75
EER96863	Sorghum	peroxisome	30.68	17.03
OQU89618	Sorghum	peroxisome	30.11	16.54

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	EntrezGene:8076801	InterPro:ADH_C	UniProt:C5Y7L6
EnsemblPlants:EES08221	ProteinID:EES08221	ProteinID:EES08221.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107
PFAM:PF16884	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF1	SMART:SM00829	EnsemblPlantsGene:SORBI_3005G082500
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0001A865B0	RefSeq:XP_002449233.1	:	:

Description

hypothetical protein

Coordinates

chr5:+:10991903..10993376

Molecular Weight (calculated)

38143.3 Da

IEP (calculated)

5.428

GRAVY (calculated)

0.170

Length

352 amino acids

Sequence
(BLAST)

001: MAGSSEEKVA LVVQNKKVVL RSHVTGFPNE DDMEIMVDTT KLCVPAGMTA VLIKNLYLSC DPWMRFRMSK HEDGGLPPAF VIGEALVNFT VGKVVDSTHP
101: EFNAGDLVWG MSAWEEYTLV TQPESLHKIN HTELPLSYYT GVLGMPGLTA YACFFEVGKP KKGDFVFVSA ASGAVGQLVG QLAKIAGCYV VGSAGSDEKV
201: SLLKAKFGYD DAFNYKMETD LGAALKRCLP GGIDIYFDNV GGATLDAALL QMRPGGRVAV CGMISQYNLV EPYGLRNLFC IMPKAIRVEG FYFTFYMHVY
301: ARFEEEMAGY IKDGKVTVVE DVVEGIDSAP AALIGLFSGK NVGKQLVAIA RA

Best Arabidopsis Sequence Match ( AT3G03080.1 )
(BLAST)

001: MATSGNATVA NKQVILRDYV TGFPKESDLI FTDSTIDLKI PEGSKTVLVK NLYLSCDPYM RIRMGKPDPG TAALAPHYIP GEPIYGFSVS KVIDSGHPDY
101: KKGDLLWGLV GWGEYSLITP DFSHYKIQHT DVPLSYYTGL LGMPGMTAYA GFYEICSPKK GETVFVSAAS GAVGQLVGQF AKIMGCYVVG SAGSNEKVDL
201: LKNKFGFDDA FNYKAEPDLN AALKRCFPEG IDIYFENVGG KMLDAVLLNM KLHGRIAVCG MISQYNLEDQ EGVHNLANVI YKRIRIKGFV VSDYFDKHLK
301: FLDFVLPYIR EGKITYVEDV VEGLENGPSA LLGLFHGKNV GKQLIAVARE

Arabidopsis Description

Putative NADP-dependent oxidoreductase [Source:UniProtKB/TrEMBL;Acc:Q9M9M7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.