Factsheet for Solyc12g096760.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075488	Potato	cytosol	98.54	98.54
Solyc12g010960.1.1	Tomato	cytosol	34.11	77.48
Solyc06g063040.1.1	Tomato	extracellular, plastid	75.22	75.22
VIT_05s0094g01120.t01	Wine grape	cytosol	74.93	74.49
Solyc03g007200.1.1	Tomato	cytosol	67.35	73.8
Solyc12g010950.1.1	Tomato	cytosol	74.34	73.7
GSMUA_Achr5P17110_001	Banana	cytosol	51.6	73.14
Solyc01g080030.1.1	Tomato	cytosol	56.56	72.66
Solyc12g010970.1.1	Tomato	cytosol	39.65	67.33
GSMUA_Achr6P06920_001	Banana	cytosol	67.35	66.57
Os04t0497000-01	Rice	cytosol	66.18	65.8
TraesCS5A01G303300.1	Wheat	cytosol	53.94	64.91
TraesCS5D01G310500.1	Wheat	cytosol	64.43	64.43
TraesCS5A01G303400.1	Wheat	cytosol	64.43	63.87
TraesCS5B01G303800.1	Wheat	cytosol	63.85	63.85
TraesCS5D01G310600.1	Wheat	cytosol	64.43	63.69
Os12t0227400-01	Rice	cytosol	63.56	63.01
Zm00001d023990_P001	Maize	cytosol	62.97	62.61
TraesCS5B01G097900.1	Wheat	cytosol	63.27	62.54
TraesCS2B01G083300.1	Wheat	cytosol	62.68	62.32
Os12t0226900-01	Rice	cytosol	62.68	62.14
EES16901	Sorghum	cytosol	63.56	61.76
KXG23283	Sorghum	cytosol	50.44	61.57
TraesCS2D01G068700.1	Wheat	cytosol	62.1	61.38
TraesCS2A01G069900.1	Wheat	peroxisome	61.52	61.34
TraesCS2A01G070000.1	Wheat	cytosol	61.81	61.27
TraesCS2D01G068900.1	Wheat	cytosol	61.81	61.27
TraesCS5D01G103800.1	Wheat	cytosol	61.81	61.1
Os12t0226700-01	Rice	plasma membrane	61.52	60.98
TraesCS2B01G083600.2	Wheat	cytosol	61.22	60.52
Solyc05g055700.2.1	Tomato	cytosol	62.39	59.94
Zm00001d007285_P002	Maize	peroxisome	61.81	59.89
Os12t0225900-01	Rice	cytosol, mitochondrion	60.06	59.71
TraesCS5A01G091700.1	Wheat	cytosol	59.18	58.84
KXG28081	Sorghum	peroxisome	60.64	58.59
EES08221	Sorghum	cytosol	59.77	58.24
Solyc11g030720.1.1	Tomato	cytoskeleton, cytosol, peroxisome	58.31	58.14
OQU83135	Sorghum	cytosol	59.18	57.67
Os12t0226400-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	57.43	56.61
Zm00001d049032_P001	Maize	cytosol	59.18	56.55
Zm00001d049031_P001	Maize	peroxisome	40.82	56.0
Os11t0255500-01	Rice	cytosol	58.31	55.71
TraesCS4B01G086100.1	Wheat	cytosol	57.73	55.15
TraesCS4A01G229900.1	Wheat	cytosol	55.98	54.7
TraesCS5B01G303700.1	Wheat	golgi	64.14	53.92
Solyc06g064670.1.1	Tomato	cytosol	10.79	48.05
Solyc09g091700.2.1	Tomato	cytosol, nucleus, peroxisome	43.15	47.44
GSMUA_Achr5P17100_001	Banana	cytosol	13.7	43.93
Solyc07g045090.2.1	Tomato	cytoskeleton, cytosol, peroxisome	41.98	41.86
Solyc07g045080.2.1	Tomato	cytoskeleton, cytosol, peroxisome	36.15	41.2
KRH49605	Soybean	cytosol	10.79	31.62
Solyc01g108150.2.1	Tomato	nucleus	30.61	16.56

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:K4DHE9
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF16884	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF9
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	EnsemblPlantsGene:Solyc12g096760.1	EnsemblPlants:Solyc12g096760.1.1	UniParc:UPI0001EF0CC1

Description

No Description!

Coordinates

chr12:+:65539079..65542630

Molecular Weight (calculated)

38040.1 Da

IEP (calculated)

7.019

GRAVY (calculated)

-0.102

Length

343 amino acids

Sequence
(BLAST)

001: MGEEISNKQI LLKDYVNGFP KESDMELRIS SMKLKVPEDS NSVLVKNLYL SCDPYMRPRM KKTEGSYTDS FTPGSPIVGF GVAKVVDSAH PKFKKDELVW
101: GITGWEEYSV IKAPETLFKI HNTDVPLSYY TGILGMPGIT AYGGFYELCS PKKGETVYVS AASGAVGQLV GQFAKLIGCY VVGSAGSKEK VELLKNKFGF
201: DEAFNYKEEQ DLSAALKRYF PDGIDIYFEN VGGKMLDAVL LNMRVHGRIA VCGMISQYNL EQNEGVHNLF CLISKRLRMQ GFLAVDYFPL YKKFVEMVTP
301: HIKEGKVTYV EDIAEGIESA PGALVGLFSG RNVGKQVVLV ARE

Best Arabidopsis Sequence Match ( AT5G16970.1 )
(BLAST)

001: MTATNKQVIL KDYVSGFPTE SDFDFTTTTV ELRVPEGTNS VLVKNLYLSC DPYMRIRMGK PDPSTAALAQ AYTPGQPIQG YGVSRIIESG HPDYKKGDLL
101: WGIVAWEEYS VITPMTHAHF KIQHTDVPLS YYTGLLGMPG MTAYAGFYEV CSPKEGETVY VSAASGAVGQ LVGQLAKMMG CYVVGSAGSK EKVDLLKTKF
201: GFDDAFNYKE ESDLTAALKR CFPNGIDIYF ENVGGKMLDA VLVNMNMHGR IAVCGMISQY NLENQEGVHN LSNIIYKRIR IQGFVVSDFY DKYSKFLEFV
301: LPHIREGKIT YVEDVADGLE KAPEALVGLF HGKNVGKQVV VVARE

Arabidopsis Description

AERNADPH-dependent oxidoreductase 2-alkenal reductase [Source:UniProtKB/Swiss-Prot;Acc:Q39172]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.