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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 1
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytoskeleton, cytosol, peroxisome
Any Predictor:cytoskeleton, cytosol, mitochondrion, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc07g045090.2.1 Tomato cytoskeleton, cytosol, peroxisome 92.36 80.81
KRH26780 Soybean cytosol 64.12 55.14
VIT_12s0059g00670.t01 Wine grape cytoskeleton, cytosol, peroxisome 64.12 53.46
KRH26779 Soybean cytosol 61.13 50.83
KRH22573 Soybean cytoskeleton, cytosol, peroxisome 61.46 50.82
VIT_12s0059g00690.t01 Wine grape cytoskeleton, cytosol, peroxisome 60.8 50.69
Solyc03g007200.1.1 Tomato cytosol 40.2 38.66
Solyc12g010960.1.1 Tomato cytosol 18.94 37.75
Solyc12g010950.1.1 Tomato cytosol 42.52 36.99
Solyc12g096760.1.1 Tomato extracellular 41.2 36.15
Solyc06g063040.1.1 Tomato extracellular, plastid 40.2 35.28
Solyc12g010970.1.1 Tomato cytosol 22.92 34.16
Solyc01g080030.1.1 Tomato cytosol 29.9 33.71
Solyc11g030720.1.1 Tomato cytoskeleton, cytosol, peroxisome 36.54 31.98
Solyc05g055700.2.1 Tomato cytosol 36.54 30.81
Solyc09g091700.2.1 Tomato cytosol, nucleus, peroxisome 29.9 28.85
Solyc06g064670.1.1 Tomato cytosol 6.31 24.68
Solyc01g108150.2.1 Tomato nucleus 25.91 12.3
Protein Annotations
EnsemblPlants:Solyc07g045080.2.1EnsemblPlantsGene:Solyc07g045080.2Gene3D:3.40.50.720Gene3D:3.90.180.10GO:GO:0008150GO:GO:0008152
GO:GO:0055114InterPro:ADH_CInterPro:GroES-like_sfInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR43205PANTHER:PTHR43205:SF6
PFAM:PF00107PFAM:PF16884SEG:segSUPFAM:SSF50129SUPFAM:SSF51735UniParc:UPI000276C9FC
UniProt:K4CER6MapMan:50.1.3::::
Description
No Description!
Coordinates
chr7:+:58194320..58196565
Molecular Weight (calculated)
32745.7 Da
IEP (calculated)
7.161
GRAVY (calculated)
0.074
Length
301 amino acids
Sequence
(BLAST)
001: MATAEVQSRE WYVASYAPIG VPNSDHIKLR TLTLSLQADS IPHGNVAFQI LYVSIDPYVR TQLSGLNDGL YLPQISLGQV ITAFGIGKVI RSKDTNFSEG
101: EIVMSRICPV AEFGVLPSNL LQKINHAHGV ALPDYLSCLG MPGITAWVGI EKIGNAKEGS NVYISAAAGG VGIIAGQLAK VKGCRVVGSV GSDHKVKLLK
201: EECGYDEAFN YRIETDYDAA LTKYFPNGID VYFDNVGGKM LEAVLSHVNH GARIALCGMI SEYNKVWTER EGVRNLLNMV GKEVMMKGFM VGSYYNTLRN
301: L
Best Arabidopsis Sequence Match ( AT1G26320.1 )
(BLAST)
001: MTNAEAVTVT NKQIIFPDYV TGFPKESDLK ITTTTIDLRL PEGSTSVLVK NLYLSCDPYM RICMGKPDPL SSSLVPPYKT GVPIIGLGVS KVIDSGHPDY
101: KKGDLLWGLV GWEEYSVITL TTYSHFKIEH TDVPLSYYTG LLGMPGMTAY AGFYEVCSPK KGETVFVSAA SGAVGQLVGQ FAKLMGCYVV GSAGSKEKVY
201: LLKTKFGFDD AFNYKEEKDF SAALKRYFPE GIDIYFENVG GKMLDAVLIN MKLHGRVAVC GMISQYNLVD PEGVHNLPTI LYKRIQLQGF GVCDFYDKYP
301: KFLDFVLPYI REGKITYVED IAEGFESGPS ALLGLFEGKN VGKQLFVVAR E
Arabidopsis Description
Allyl alcohol dehydrogenase, putative [Source:UniProtKB/TrEMBL;Acc:Q9C677]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.