CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26779	Soybean	cytosol	91.21	91.71
KRH26780	Soybean	cytosol	72.8	75.71
VIT_12s0059g00670.t01	Wine grape	cytoskeleton, cytosol, peroxisome	64.84	65.37
Solyc07g045090.2.1	Tomato	cytoskeleton, cytosol, peroxisome	59.07	62.5
VIT_12s0059g00690.t01	Wine grape	cytoskeleton, cytosol, peroxisome	60.99	61.5
Solyc07g045080.2.1	Tomato	cytoskeleton, cytosol, peroxisome	50.82	61.46
KRH48965	Soybean	cytosol	29.95	41.92
KRH66322	Soybean	nucleus	36.54	38.89
KRH66319	Soybean	cytosol	36.26	38.48
KRH66321	Soybean	cytosol	36.26	38.48
KRH66306	Soybean	nucleus	36.26	38.48
KRH36166	Soybean	cytosol	26.37	38.4
KRH46910	Soybean	cytosol	23.35	37.28
KRH44857	Soybean	cytosol	17.86	37.14
KRH01782	Soybean	nucleus	34.34	35.92
KRH66323	Soybean	cytosol	34.07	35.84
KRH54972	Soybean	cytosol	31.04	32.66
KRG90594	Soybean	mitochondrion	8.79	29.36
KRH50260	Soybean	extracellular	15.66	27.4
KRH66318	Soybean	cytosol	9.62	26.92
KRG99608	Soybean	cytosol	10.71	20.21
KRH66218	Soybean	cytosol	6.59	20.0
KRH71155	Soybean	nucleus	24.45	14.06
KRH49605	Soybean	cytosol	4.4	13.68
KRG88432	Soybean	cytosol	4.12	5.91

Protein Annotations

EntrezGene:100811155	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	EMBL:ACUP02008422	InterPro:ADH_C
EnsemblPlantsGene:GLYMA_13G309100	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:GroES-like_sf	UniProt:K7M2W5	EnsemblPlants:KRH22573	ProteinID:KRH22573	ProteinID:KRH22573.1
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF16884	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF6
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000233BF34	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:+:40474211..40476757

Molecular Weight (calculated)

40546.7 Da

IEP (calculated)

5.071

GRAVY (calculated)

-0.149

Length

364 amino acids

Sequence
(BLAST)

001: MGDHEEVRSL VVEEEMRVVE SKEWYLVSYA PHGVPTTDHL KLRKVRLSIA PESIPDGHVA IEMLLFSIDP YLRGRLNGTL DGLYFPQFEL NQVITIYGIG
101: RVKRSNDSEY KEGDIVLSAN FPAAEYCVMP SCEIVRKIDA ACGISLPDYL STLGVPGFAA WLGIEVLADP KPGSNVFISA ASGGVGMIAG QLAKIRDCRV
201: IGSTGSDEKV RLIKEEFGYD DGFNYKNEED LDAVLSKFFP NGIDVYFDNV GGKMLESVLN HVNRYARIPL CGMISQYNQA WTEREGVRNL LNMVGKEVRM
301: EGFLLNTHFD RFGEFAKEME GHIKEGRLKP KTKINIGIES FLDSLNSLFS STNIGKVVVQ VNKD

Best Arabidopsis Sequence Match ( AT1G65560.1 )
(BLAST)

001: MGEVSVVENK KVILKNYVDG IPTETDMEVK LGETIELKAP KGSSCFLVKN LYLSCDPYMR GRMRDFHGSY LPPFVPGQRI EGFGLARVID SDDTNYKPGD
101: IVSGIIGWEE YSLLRSSDNL QLRNIQLDDD IPLSYHLGLL GMAGFTAYAG FNEICCPKKG DSVFVSAACG AVGQLVGQLA KLHGCYVVGS AGSKQKVEIL
201: KNELGYDEAF NYKEEADLDT ALKRYFPEGI DIYFDNVGGS MLDAALLNMK VRGRIALCGM VSLQSLSTSS QGIKNLYSAI YKRLRLEGFL QSDYLHIFPQ
301: FLENVKRYYK EGKIVYVEDI SEGLDLAPAA LVGLFSGKNI GKQVVRVAKE

Arabidopsis Description

Zinc-binding dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.