Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- plastid 1
- peroxisome 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0226700-01 | Rice | plasma membrane | 85.55 | 85.55 |
| Os12t0227400-01 | Rice | cytosol | 84.68 | 84.68 |
| Os12t0225900-01 | Rice | cytosol, mitochondrion | 77.75 | 77.97 |
| Os12t0226400-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 77.17 | 76.72 |
| Zm00001d023990_P001 | Maize | cytosol | 75.72 | 75.94 |
| TraesCS5A01G303300.1 | Wheat | cytosol | 61.56 | 74.74 |
| EES16901 | Sorghum | cytosol | 75.14 | 73.65 |
| TraesCS5D01G310600.1 | Wheat | cytosol | 73.41 | 73.2 |
| TraesCS5A01G303400.1 | Wheat | cytosol | 73.12 | 73.12 |
| TraesCS5B01G097900.1 | Wheat | cytosol | 72.54 | 72.33 |
| HORVU5Hr1G024040.1 | Barley | cytosol | 71.97 | 71.97 |
| TraesCS5D01G310500.1 | Wheat | cytosol | 71.1 | 71.72 |
| TraesCS5B01G303800.1 | Wheat | cytosol | 71.1 | 71.72 |
| TraesCS2D01G068900.1 | Wheat | cytosol | 71.39 | 71.39 |
| TraesCS5D01G103800.1 | Wheat | cytosol | 71.39 | 71.18 |
| TraesCS2D01G068700.1 | Wheat | cytosol | 70.81 | 70.61 |
| HORVU2Hr1G010270.1 | Barley | cytosol, peroxisome | 70.52 | 70.32 |
| TraesCS2A01G070000.1 | Wheat | cytosol | 70.23 | 70.23 |
| KXG23283 | Sorghum | cytosol | 56.65 | 69.75 |
| TraesCS2B01G083300.1 | Wheat | cytosol | 69.08 | 69.28 |
| TraesCS2B01G083600.2 | Wheat | cytosol | 69.36 | 69.16 |
| GSMUA_Achr5P17110_001 | Banana | cytosol | 48.27 | 69.01 |
| TraesCS5A01G091700.1 | Wheat | cytosol | 68.79 | 68.99 |
| TraesCS2A01G069900.1 | Wheat | peroxisome | 67.63 | 68.02 |
| VIT_05s0094g01120.t01 | Wine grape | cytosol | 67.05 | 67.25 |
| Os04t0497000-01 | Rice | cytosol | 65.03 | 65.22 |
| VIT_05s0094g01160.t01 | Wine grape | cytosol | 63.58 | 63.77 |
| HORVU2Hr1G010250.1 | Barley | cytosol | 64.74 | 63.64 |
| Os11t0255500-01 | Rice | cytosol | 65.9 | 63.51 |
| Bra032019.1-P | Field mustard | cytosol | 61.56 | 63.39 |
| VIT_05s0094g01130.t01 | Wine grape | cytosol | 62.43 | 63.16 |
| CDY43153 | Canola | cytosol | 62.72 | 63.08 |
| AT5G16990.1 | Thale cress | cytosol | 62.43 | 62.97 |
| CDY28735 | Canola | cytosol | 62.72 | 62.9 |
| AT5G17000.1 | Thale cress | cytosol | 62.72 | 62.9 |
| CDX69408 | Canola | cytosol | 62.43 | 62.79 |
| Bra008581.1-P | Field mustard | cytosol | 62.43 | 62.79 |
| Solyc12g096760.1.1 | Tomato | extracellular | 62.14 | 62.68 |
| VIT_05s0094g01140.t01 | Wine grape | cytosol | 61.85 | 62.57 |
| AT5G16970.1 | Thale cress | cytosol | 62.14 | 62.32 |
| Solyc12g010960.1.1 | Tomato | cytosol | 27.17 | 62.25 |
| CDY16966 | Canola | cytosol | 62.72 | 61.82 |
| CDY38077 | Canola | cytosol | 62.43 | 61.71 |
| TraesCS5B01G303700.1 | Wheat | golgi | 72.54 | 61.52 |
| AT3G03080.1 | Thale cress | cytosol | 62.14 | 61.43 |
| CDX85479 | Canola | cytosol | 62.14 | 61.43 |
| Bra024723.1-P | Field mustard | cytosol | 62.14 | 61.25 |
| CDY16150 | Canola | cytosol | 62.14 | 61.25 |
| Solyc01g080030.1.1 | Tomato | cytosol | 47.11 | 61.05 |
| CDX85014 | Canola | cytosol | 61.85 | 60.97 |
| Bra023591.1-P | Field mustard | cytosol | 61.27 | 60.57 |
| CDX78721 | Canola | cytosol | 62.14 | 60.56 |
| VIT_05s0094g01150.t01 | Wine grape | cytosol | 60.12 | 60.47 |
| AT1G26320.1 | Thale cress | cytosol | 61.27 | 60.4 |
| Solyc06g063040.1.1 | Tomato | extracellular, plastid | 59.83 | 60.35 |
| Solyc12g010950.1.1 | Tomato | cytosol | 60.12 | 60.12 |
| AT5G16960.2 | Thale cress | cytosol | 60.12 | 60.12 |
| AT5G37980.1 | Thale cress | plastid | 61.27 | 60.06 |
| VIT_05s0094g01260.t01 | Wine grape | cytosol | 59.25 | 59.94 |
| Solyc03g007200.1.1 | Tomato | cytosol | 54.05 | 59.74 |
| AT5G37940.1 | Thale cress | cytosol, peroxisome, plastid | 60.69 | 59.49 |
| AT5G38000.1 | Thale cress | plastid | 59.83 | 58.64 |
| VIT_05s0094g01250.t01 | Wine grape | cytosol | 47.11 | 58.42 |
| AT5G16980.2 | Thale cress | cytosol | 51.16 | 58.03 |
| VIT_05s0094g01230.t01 | Wine grape | cytosol | 45.95 | 57.61 |
| AT3G59845.1 | Thale cress | cytosol, golgi, peroxisome | 56.65 | 56.65 |
| Bra007482.1-P | Field mustard | cytosol | 56.65 | 55.52 |
| CDY05974 | Canola | cytosol | 56.36 | 55.24 |
| HORVU2Hr1G028990.1 | Barley | plastid | 29.48 | 54.55 |
| Solyc12g010970.1.1 | Tomato | cytosol | 30.64 | 52.48 |
| Bra006381.1-P | Field mustard | cytosol | 61.85 | 49.42 |
| CDX70729 | Canola | golgi, plastid | 63.01 | 46.09 |
| Os06t0602900-01 | Rice | cytosol | 45.38 | 45.91 |
| Os09t0459800-01 | Rice | nucleus, plasma membrane | 30.64 | 16.72 |
Protein Annotations
| Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | EntrezGene:4351818 | MapMan:50.1.3 | ProteinID:ABA96821.1 | InterPro:ADH_C |
| EMBL:AK071631 | EMBL:AK104386 | ProteinID:BAF29452.1 | ProteinID:BAT16407.1 | ProteinID:EAZ20022.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:GroES-like_sf |
| InterPro:NAD(P)-bd_dom_sf | EnsemblPlantsGene:Os12g0226900 | EnsemblPlants:Os12t0226900-01 | PFAM:PF00107 | PFAM:PF16884 | InterPro:PKS_ER |
| PANTHER:PTHR43205 | PANTHER:PTHR43205:SF14 | UniProt:Q2QVJ6 | SMART:SM00829 | SUPFAM:SSF50129 | SUPFAM:SSF51735 |
| UniParc:UPI0000681763 | RefSeq:XP_015620335.1 | : | : | : | : |
Description
CLASS I CLP ATPASE C2Similar to Allyl alcohol dehydrogenase. (Os12t0226900-01)
Coordinates
chr12:+:6916185..6918431
Molecular Weight (calculated)
38369.3 Da
IEP (calculated)
5.534
GRAVY (calculated)
-0.003
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATASNKRV ILKRYVTGLL SEDDMEVVTT EVPPLAVVPA GSEAVVVKNL YVSCDPYMRN RMTRHEVPSY VSDFIPGEVL ANFGVMRVIS SGHPDFKAGD
101: LVWGITGWEE YTVINNPESL FRINHPKLPL SYYTGILGMP GLTAYAGFFE VSKPKKGEYV FISAASGAVG QIVGQLAKII GCYVVGSAGS DEKVSLLKTK
201: FGFNDAFNYK KEPDLEAALR RYFPEGIDIY FENVGGETLD AVLPNMRLGG RIAACGMISQ YNLERPEGVK NLFYIVTKRL RMEGFLVFDF YDRYYQFEDE
301: MARYLKEGKV AYVEDVVEGL DAAPAALIKL FTGRNVGKQL VAIARE
101: LVWGITGWEE YTVINNPESL FRINHPKLPL SYYTGILGMP GLTAYAGFFE VSKPKKGEYV FISAASGAVG QIVGQLAKII GCYVVGSAGS DEKVSLLKTK
201: FGFNDAFNYK KEPDLEAALR RYFPEGIDIY FENVGGETLD AVLPNMRLGG RIAACGMISQ YNLERPEGVK NLFYIVTKRL RMEGFLVFDF YDRYYQFEDE
301: MARYLKEGKV AYVEDVVEGL DAAPAALIKL FTGRNVGKQL VAIARE
001: MATSGNATVA NKQVILRDYV TGFPKESDLI FTDSTIDLKI PEGSKTVLVK NLYLSCDPYM RIRMGKPDPG TAALAPHYIP GEPIYGFSVS KVIDSGHPDY
101: KKGDLLWGLV GWGEYSLITP DFSHYKIQHT DVPLSYYTGL LGMPGMTAYA GFYEICSPKK GETVFVSAAS GAVGQLVGQF AKIMGCYVVG SAGSNEKVDL
201: LKNKFGFDDA FNYKAEPDLN AALKRCFPEG IDIYFENVGG KMLDAVLLNM KLHGRIAVCG MISQYNLEDQ EGVHNLANVI YKRIRIKGFV VSDYFDKHLK
301: FLDFVLPYIR EGKITYVEDV VEGLENGPSA LLGLFHGKNV GKQLIAVARE
101: KKGDLLWGLV GWGEYSLITP DFSHYKIQHT DVPLSYYTGL LGMPGMTAYA GFYEICSPKK GETVFVSAAS GAVGQLVGQF AKIMGCYVVG SAGSNEKVDL
201: LKNKFGFDDA FNYKAEPDLN AALKRCFPEG IDIYFENVGG KMLDAVLLNM KLHGRIAVCG MISQYNLEDQ EGVHNLANVI YKRIRIKGFV VSDYFDKHLK
301: FLDFVLPYIR EGKITYVEDV VEGLENGPSA LLGLFHGKNV GKQLIAVARE
Arabidopsis Description
Putative NADP-dependent oxidoreductase [Source:UniProtKB/TrEMBL;Acc:Q9M9M7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.