Factsheet for VIT_05s0094g01250.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P17110_001	Banana	cytosol	57.71	66.53
VIT_05s0094g01130.t01	Wine grape	cytosol	73.12	59.65
VIT_05s0094g01260.t01	Wine grape	cytosol	71.33	58.19
VIT_05s0094g01120.t01	Wine grape	cytosol	71.68	57.97
VIT_05s0094g01160.t01	Wine grape	cytosol	71.33	57.68
VIT_05s0094g01140.t01	Wine grape	cytosol	68.1	55.56
TraesCS5A01G303300.1	Wheat	cytosol	55.91	54.74
KXG23283	Sorghum	cytosol	54.12	53.74
VIT_05s0094g01150.t01	Wine grape	cytosol	65.95	53.49
GSMUA_Achr6P06920_001	Banana	cytosol	65.23	52.45
Os04t0497000-01	Rice	cytosol	62.72	50.72
VIT_00s0220g00130.t01	Wine grape	cytosol	62.01	50.0
VIT_05s0094g01230.t01	Wine grape	cytosol	48.03	48.55
Os12t0226900-01	Rice	cytosol	58.42	47.11
Zm00001d023990_P001	Maize	cytosol	57.35	46.38
TraesCS5B01G303800.1	Wheat	cytosol	56.99	46.36
TraesCS5D01G310600.1	Wheat	cytosol	57.35	46.11
TraesCS5D01G310500.1	Wheat	cytosol	56.63	46.06
TraesCS5A01G303400.1	Wheat	cytosol	56.99	45.95
HORVU2Hr1G115450.1	Barley	cytosol	13.26	45.68
TraesCS2B01G083300.1	Wheat	cytosol	56.27	45.51
Os12t0227400-01	Rice	cytosol	56.27	45.38
TraesCS2D01G068900.1	Wheat	cytosol	56.27	45.38
EES16901	Sorghum	cytosol	57.35	45.33
Zm00001d007285_P002	Maize	peroxisome	57.35	45.2
TraesCS2A01G070000.1	Wheat	cytosol	55.91	45.09
TraesCS2D01G068700.1	Wheat	cytosol	55.91	44.96
Os12t0225900-01	Rice	cytosol, mitochondrion	55.56	44.93
KXG28081	Sorghum	peroxisome	56.63	44.51
TraesCS2A01G069900.1	Wheat	peroxisome	54.84	44.48
TraesCS5B01G097900.1	Wheat	cytosol	55.2	44.38
TraesCS5D01G103800.1	Wheat	cytosol	55.2	44.38
OQU83135	Sorghum	cytosol	55.91	44.32
Os12t0226700-01	Rice	plasma membrane	54.84	44.22
TraesCS2B01G083600.2	Wheat	cytosol	54.84	44.09
Os12t0226400-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	54.84	43.97
EES08221	Sorghum	cytosol	55.2	43.75
Os11t0255500-01	Rice	cytosol	55.56	43.18
Zm00001d049032_P001	Maize	cytosol	53.76	41.78
TraesCS5A01G091700.1	Wheat	cytosol	51.61	41.74
Zm00001d049031_P001	Maize	peroxisome	37.28	41.6
TraesCS4A01G229900.1	Wheat	cytosol	52.33	41.6
TraesCS4B01G086100.1	Wheat	cytosol	53.41	41.5
VIT_11s0016g05230.t01	Wine grape	cytosol	48.03	38.73
TraesCS5B01G303700.1	Wheat	golgi	56.63	38.73
VIT_11s0052g00410.t01	Wine grape	cytosol	46.95	37.75
VIT_11s0052g00420.t01	Wine grape	cytosol	45.88	37.54
VIT_12s0059g00690.t01	Wine grape	cytoskeleton, cytosol, peroxisome	38.71	29.92
VIT_12s0059g00670.t01	Wine grape	cytoskeleton, cytosol, peroxisome	37.28	28.81
VIT_03s0063g00610.t01	Wine grape	peroxisome	30.11	13.25
VIT_04s0043g00180.t01	Wine grape	cytosol, extracellular, nucleus	6.09	12.88
GSMUA_Achr5P17100_001	Banana	cytosol	3.94	10.28

Protein Annotations

EntrezGene:100254133	wikigene:100254133	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C
EMBL:AM465903	ProteinID:CAN68146	ProteinID:CAN68146.1	ProteinID:CBI24742	ProteinID:CBI24742.3	UniProt:D7T2L1
EMBL:FN595507	GO:GO:0008150	GO:GO:0008152	GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100254133
wikigene:LOC100254133	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PANTHER:PTHR43205	PANTHER:PTHR43205:SF9	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI0001BE27B1	ArrayExpress:VIT_05s0094g01250	EnsemblPlantsGene:VIT_05s0094g01250	EnsemblPlants:VIT_05s0094g01250.t01	RefSeq:XP_003632102
RefSeq:XP_003632102.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5:-:24534886..24536504

Molecular Weight (calculated)

30670.8 Da

IEP (calculated)

6.308

GRAVY (calculated)

-0.091

Length

279 amino acids

Sequence
(BLAST)

001: MMITSSSLKP GSAITGYGVA RVLDSGDPNF REGELIWGTT GWEEYSLITT SSIRFKIQHT DVPLSNYTGI FGMPGITAYA RFYEICSPKK GEHVSVSAAS
101: GAVGQLVGQF AKLMGCYVVG SVGSKEKVDL LKNKHGFNEA FNYKEEHELD AALKRCFPEG IDIYFDNVDG KMLDAILNMR TRGRIAACGM VSQYNLEQPE
201: SIKNLINIIS KQVCIQGFVS HEQYHLYPQM LDTLLPYIRE GKLVYVEDIA EGLERSPAAL VGLFSGHNVG KQVAAVAHE

Best Arabidopsis Sequence Match ( AT3G03080.1 )
(BLAST)

001: MATSGNATVA NKQVILRDYV TGFPKESDLI FTDSTIDLKI PEGSKTVLVK NLYLSCDPYM RIRMGKPDPG TAALAPHYIP GEPIYGFSVS KVIDSGHPDY
101: KKGDLLWGLV GWGEYSLITP DFSHYKIQHT DVPLSYYTGL LGMPGMTAYA GFYEICSPKK GETVFVSAAS GAVGQLVGQF AKIMGCYVVG SAGSNEKVDL
201: LKNKFGFDDA FNYKAEPDLN AALKRCFPEG IDIYFENVGG KMLDAVLLNM KLHGRIAVCG MISQYNLEDQ EGVHNLANVI YKRIRIKGFV VSDYFDKHLK
301: FLDFVLPYIR EGKITYVEDV VEGLENGPSA LLGLFHGKNV GKQLIAVARE

Arabidopsis Description

Putative NADP-dependent oxidoreductase [Source:UniProtKB/TrEMBL;Acc:Q9M9M7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.