Factsheet for GSMUA_Achr6P06920_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P17110_001	Banana	cytosol	57.93	83.06
VIT_05s0094g01120.t01	Wine grape	cytosol	71.47	71.88
Os04t0497000-01	Rice	cytosol	70.61	71.01
VIT_05s0094g01130.t01	Wine grape	cytosol	67.44	68.42
Solyc12g096760.1.1	Tomato	extracellular	66.57	67.35
GSMUA_Achr5P17090_001	Banana	cytosol	66.28	66.67
VIT_05s0094g01160.t01	Wine grape	cytosol	65.99	66.38
Solyc01g080030.1.1	Tomato	cytosol	51.01	66.29
Bra008581.1-P	Field mustard	cytosol	65.71	66.28
CDY43153	Canola	cytosol	65.71	66.28
CDX69408	Canola	cytosol	65.71	66.28
AT5G16990.1	Thale cress	cytosol	65.42	66.18
AT5G17000.1	Thale cress	cytosol	65.71	66.09
CDY28735	Canola	cytosol	65.71	66.09
Solyc12g010950.1.1	Tomato	cytosol	65.42	65.61
Solyc12g010960.1.1	Tomato	cytosol	28.53	65.56
AT5G16960.2	Thale cress	cytosol	65.13	65.32
VIT_05s0094g01250.t01	Wine grape	cytosol	52.45	65.23
VIT_05s0094g01140.t01	Wine grape	cytosol	64.27	65.2
Bra032019.1-P	Field mustard	cytosol	63.11	65.18
AT5G16970.1	Thale cress	cytosol	64.55	64.93
AT3G03080.1	Thale cress	cytosol	65.42	64.86
Bra024723.1-P	Field mustard	cytosol	65.42	64.67
CDY16150	Canola	cytosol	65.42	64.67
CDY16966	Canola	cytosol	65.42	64.67
AT1G26320.1	Thale cress	cytosol	65.42	64.67
CDY38077	Canola	cytosol	65.13	64.57
CDX85479	Canola	cytosol	64.84	64.29
CDX85014	Canola	cytosol	64.84	64.1
Solyc06g063040.1.1	Tomato	extracellular, plastid	62.82	63.56
VIT_05s0094g01150.t01	Wine grape	cytosol	62.82	63.37
AT5G16980.2	Thale cress	cytosol	55.62	63.28
Bra023591.1-P	Field mustard	cytosol	63.69	63.14
CDX78721	Canola	cytosol	64.55	63.1
AT5G37980.1	Thale cress	plastid	63.98	62.89
Solyc03g007200.1.1	Tomato	cytosol	56.48	62.62
VIT_05s0094g01230.t01	Wine grape	cytosol	49.57	62.32
VIT_05s0094g01260.t01	Wine grape	cytosol	61.38	62.28
AT5G37940.1	Thale cress	cytosol, peroxisome, plastid	62.25	61.19
GSMUA_Achr10P...	Banana	cytosol	60.81	60.81
AT5G38000.1	Thale cress	plastid	61.38	60.34
Bra007482.1-P	Field mustard	cytosol	60.23	59.21
Solyc12g010970.1.1	Tomato	cytosol	34.01	58.42
AT3G59845.1	Thale cress	cytosol, golgi, peroxisome	58.21	58.38
CDY05974	Canola	cytosol	59.37	58.36
GSMUA_Achr5P17100_001	Banana	cytosol	17.29	56.07
Bra006381.1-P	Field mustard	cytosol	64.84	51.96
GSMUA_Achr7P10120_001	Banana	cytosol	48.41	48.14
CDX70729	Canola	golgi, plastid	64.84	47.57
GSMUA_Achr8P08570_001	Banana	extracellular	59.37	35.52
GSMUA_Achr7P10110_001	Banana	cytosol	48.41	24.53
GSMUA_Achr6P04320_001	Banana	cytosol	29.39	16.11

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr6G06920_001	EnsemblPlants:GSMUA_Achr6P06920_001
EnsemblPlants:GSMUA_Achr6T06920_001	InterPro:GroES-like_sf	UniProt:M0T4U1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF16884
InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF15	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
UniParc:UPI000295F227	SEG:seg	:	:	:	:

Description

Probable NADP-dependent oxidoreductase P1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G06920_001]

Coordinates

chr6:-:4701106..4704693

Molecular Weight (calculated)

38607.7 Da

IEP (calculated)

6.521

GRAVY (calculated)

-0.097

Length

347 amino acids

Sequence
(BLAST)

001: MEDKVVVNKK VVLKHYIPDG PATESDMELV ATDTLRLRLP PGSTAVLVKN LYLSCDPYMR SRMTKHDEPS YVDDLVPGTP ITGYGVCKVL DSGHPDFKIG
101: DYVWGITGWE EYSLMTSTEG LFKINHTDVP LSYYTGILGM PGFTAYVGFY EIGSPKKGER VFISAASGAV GQLVGQFAKL MGCYVVGSAG SDEKVNLLKN
201: KFGFDEAFNY KKEPDLNKAL RRCFPEGIDI YFENVGGAML EAVLRNMRLN GRIAACGMIS QYNVERPEGV NHLFAIVTKR IRMQGFIVFD HFRSYREFEE
301: KVVQYIKEGK IVYVEDIAEG LENAPAALVG LFAGRNVGKQ LVIIARE

Best Arabidopsis Sequence Match ( AT3G03080.1 )
(BLAST)

001: MATSGNATVA NKQVILRDYV TGFPKESDLI FTDSTIDLKI PEGSKTVLVK NLYLSCDPYM RIRMGKPDPG TAALAPHYIP GEPIYGFSVS KVIDSGHPDY
101: KKGDLLWGLV GWGEYSLITP DFSHYKIQHT DVPLSYYTGL LGMPGMTAYA GFYEICSPKK GETVFVSAAS GAVGQLVGQF AKIMGCYVVG SAGSNEKVDL
201: LKNKFGFDDA FNYKAEPDLN AALKRCFPEG IDIYFENVGG KMLDAVLLNM KLHGRIAVCG MISQYNLEDQ EGVHNLANVI YKRIRIKGFV VSDYFDKHLK
301: FLDFVLPYIR EGKITYVEDV VEGLENGPSA LLGLFHGKNV GKQLIAVARE

Arabidopsis Description

Putative NADP-dependent oxidoreductase [Source:UniProtKB/TrEMBL;Acc:Q9M9M7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.