Factsheet for PGSC0003DMT400075488

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g096760.1.1	Tomato	extracellular	98.54	98.54
PGSC0003DMT400083197	Potato	cytosol	55.69	78.28
PGSC0003DMT400012544	Potato	cytosol	76.38	76.38
PGSC0003DMT400079649	Potato	cytosol	74.93	74.93
VIT_05s0094g01120.t01	Wine grape	cytosol	74.93	74.49
PGSC0003DMT400088089	Potato	cytosol	23.32	73.39
PGSC0003DMT400020187	Potato	cytosol	70.85	71.26
PGSC0003DMT400020183	Potato	cytosol	34.69	69.59
PGSC0003DMT400071464	Potato	cytosol	16.33	67.47
PGSC0003DMT400060048	Potato	cytosol	62.1	59.66
PGSC0003DMT400028517	Potato	cytosol	24.78	51.52
PGSC0003DMT400088882	Potato	cytosol, nucleus, peroxisome	47.81	46.99
PGSC0003DMT400095859	Potato	cytosol	24.2	44.62
PGSC0003DMT400012166	Potato	cytosol	16.33	42.11
KRH49605	Soybean	cytosol	10.5	30.77
PGSC0003DMT400066606	Potato	cytosol, endoplasmic reticulum, vacuole	30.61	16.56

Protein Annotations

EntrezGene:102597808	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf
UniProt:M1CV87	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF16884	EnsemblPlantsGene:PGSC0003DMG400029355	PGSC:PGSC0003DMG400029355
EnsemblPlants:PGSC0003DMT400075488	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF9	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI0002950F55	RefSeq:XP_006342426.1	:	:	:

Description

Allyl alcohol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400029355]

Coordinates

chr12:+:58310262..58314225

Molecular Weight (calculated)

38090.3 Da

IEP (calculated)

7.488

GRAVY (calculated)

-0.108

Length

343 amino acids

Sequence
(BLAST)

001: MGEEISNKQI LLKDYVHGFP KESDMELKIS SMKLKVPEDS NTVLVKNLYL SCDPYMRPRM KKTEGSYTDS FTPGSPIVGF GVAKVVDSAH PKFKKDELVW
101: GITGWEEYSV IKAPETLFKI HNTDVPLSYY TGILGMPGIT AYGGFYELCS PKKGETVYVS AASGAVGQLV GQFAKLIGCY VVGSAGSKEK VELLKNKFGF
201: DEAFNYKEEQ DLSAALKRYF PDGIDIYFEN VGGKMLDAVL LNMRIHGRIA VCGMISQYNL EQNEGVHNLF CLISKRLRMQ GFLAVDYFPL YKKFVEMVTP
301: HIKEGKVKYV EDIAEGIESA PGALVGLFSG RNVGKQVVLV ARE

Best Arabidopsis Sequence Match ( AT5G16970.1 )
(BLAST)

001: MTATNKQVIL KDYVSGFPTE SDFDFTTTTV ELRVPEGTNS VLVKNLYLSC DPYMRIRMGK PDPSTAALAQ AYTPGQPIQG YGVSRIIESG HPDYKKGDLL
101: WGIVAWEEYS VITPMTHAHF KIQHTDVPLS YYTGLLGMPG MTAYAGFYEV CSPKEGETVY VSAASGAVGQ LVGQLAKMMG CYVVGSAGSK EKVDLLKTKF
201: GFDDAFNYKE ESDLTAALKR CFPNGIDIYF ENVGGKMLDA VLVNMNMHGR IAVCGMISQY NLENQEGVHN LSNIIYKRIR IQGFVVSDFY DKYSKFLEFV
301: LPHIREGKIT YVEDVADGLE KAPEALVGLF HGKNVGKQVV VVARE

Arabidopsis Description

AERNADPH-dependent oxidoreductase 2-alkenal reductase [Source:UniProtKB/Swiss-Prot;Acc:Q39172]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.