Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400074985 | Potato | cytosol, nucleus, plasma membrane | 35.34 | 8.22 |
| Solyc06g016770.2.1 | Tomato | cytosol, nucleus, plasma membrane | 35.34 | 8.13 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 6.03 | 4.67 |
| GSMUA_Achr1P11310_001 | Banana | cytosol, nucleus, plasma membrane | 4.31 | 1.19 |
| GSMUA_Achr5P00540_001 | Banana | cytosol, nucleus, plasma membrane | 4.31 | 0.99 |
| GSMUA_Achr11P... | Banana | cytosol | 2.59 | 0.72 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 0.86 | 0.03 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P00560_001 | EnsemblPlants:GSMUA_Achr11T00560_001 | EnsemblPlantsGene:GSMUA_Achr11G00560_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:MARCH-like | PANTHER:PTHR23012 | PANTHER:PTHR23012:SF25 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000296A5D8 |
| UniProt:M0RN87 | MapMan:35.2 | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G00560_001]
Coordinates
chr11:+:334512..335054
Molecular Weight (calculated)
13874.4 Da
IEP (calculated)
11.687
GRAVY (calculated)
0.577
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MWIFHPNVII VMKRFVWIYA TVQFMLVVFF AHLFYSYLHM QVIISIVLAM FAGFGVAMSG NTIAIESWRW RRRRRRRWHF ASAGSLTPLE IVPSSSQQQW
101: YITRLIICCW AKWVSI
101: YITRLIICCW AKWVSI
001: MMDDKARKEE EHHVSHQHNH SPLQRDGNSA EIAQGQELSS PGRDLWRRGL VLDLPSTTPE DTTRDDLFRR NASLTSSPVA KRVNFSPMSS PRVGQRGASL
101: SPSSSTSSSS RNKPNSLKNL IPKLSFKNRN SNNDNVDIEK AADLGFVSSP SSGNGRDRST WTLTNILTPR LKKTESLPVT PIAHSNPEST HGRFAVDLVT
201: STKKGPPLPI HRSRSVPAFN KDGSQRQLGV FRVIPTPNMS PTRNTIKLND ANVDGAEDVP EEEAVCRICL VELGEDSEAF KMECLCRGEL ALAHKECTIK
301: WFTIKGNRTC DVCKQEVQNL PVTLLRMQNS RGSIGAPDAE AAHYSLWQDV PILVIVSMLA YFCFLEQLLL TKMQSGAIAV SLPFSCVLGL FASMTATTMV
401: PKRYVWIYAT TQFGLVVFFS HIFFTLVRMQ PVVAILLATI VGFGLTMSGT TGIVEFSKWR RSNRTAELPS SSQVDQPLVE TTDQNISGSR N
101: SPSSSTSSSS RNKPNSLKNL IPKLSFKNRN SNNDNVDIEK AADLGFVSSP SSGNGRDRST WTLTNILTPR LKKTESLPVT PIAHSNPEST HGRFAVDLVT
201: STKKGPPLPI HRSRSVPAFN KDGSQRQLGV FRVIPTPNMS PTRNTIKLND ANVDGAEDVP EEEAVCRICL VELGEDSEAF KMECLCRGEL ALAHKECTIK
301: WFTIKGNRTC DVCKQEVQNL PVTLLRMQNS RGSIGAPDAE AAHYSLWQDV PILVIVSMLA YFCFLEQLLL TKMQSGAIAV SLPFSCVLGL FASMTATTMV
401: PKRYVWIYAT TQFGLVVFFS HIFFTLVRMQ PVVAILLATI VGFGLTMSGT TGIVEFSKWR RSNRTAELPS SSQVDQPLVE TTDQNISGSR N
Arabidopsis Description
At3g09760/F8A24.19 [Source:UniProtKB/TrEMBL;Acc:Q940P1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.