Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P12470_001 | Banana | nucleus | 45.55 | 55.65 |
| TraesCS5B01G316900.1 | Wheat | nucleus | 28.47 | 30.77 |
| TraesCS5A01G316400.1 | Wheat | nucleus | 28.47 | 30.42 |
| TraesCS5D01G322600.1 | Wheat | nucleus | 27.76 | 30.0 |
| KXG36047 | Sorghum | cytosol | 26.69 | 28.41 |
| Zm00001d006184_P001 | Maize | mitochondrion | 26.33 | 28.14 |
| Os09t0529300-01 | Rice | mitochondrion | 24.2 | 22.22 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P18680_001 | EnsemblPlants:GSMUA_Achr1T18680_001 | EnsemblPlantsGene:GSMUA_Achr1G18680_001 | PANTHER:PTHR38366 | SEG:seg | UniParc:UPI0002951828 |
| UniProt:M0S126 | MapMan:35.2 | : | : | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G18680_001]
Coordinates
chr1:-:13967009..13971522
Molecular Weight (calculated)
32219.3 Da
IEP (calculated)
5.978
GRAVY (calculated)
-0.883
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MHRKLHPCSV KYAQVSQKRD DEEKREVLFE GVMEKEALLL HDVLNGILTI GTLGHQDSFV SQPYPAREDE LLQEEEENVE DEEKEEVKEA APAVAAAREP
101: LPAIVIESFK FKLPVEAEVN RMEMAVQDVE EAEKIQELPL LKEDKEKRER GRTTLADLFA ADAFVVNDPA ENDIKRANDI VKQQANPERK KAQRDKKEEK
201: RTPTTTKAIT NPNRKLQKLM TKMLKKKIHP EMASADTQTK ERNKEVSDGT GSRIYWVCFH GSHRRSSRCW SGCAEMNQML P
101: LPAIVIESFK FKLPVEAEVN RMEMAVQDVE EAEKIQELPL LKEDKEKRER GRTTLADLFA ADAFVVNDPA ENDIKRANDI VKQQANPERK KAQRDKKEEK
201: RTPTTTKAIT NPNRKLQKLM TKMLKKKIHP EMASADTQTK ERNKEVSDGT GSRIYWVCFH GSHRRSSRCW SGCAEMNQML P
001: MTIFNWVQKK LHQNVIKEID GVRKNEKKKR NEGISEIEKN TKAILDQVGL VDALDNWFDG VLTIGTFGFD TLNFKEEDEM DDDECGSGDL DYVVIDGSII
101: KNVDQESDPL ISVENKFYDH HEDVGNLYVQ ADTDHFGSIK TAETPAVTAA AEAEIEPQKK RTTLAELFME DHDKGYDTWH CKKPNNPNLD GEEVKYYKQN
201: GSKLSKRFSF VKKKLVMSKS KEEENDLRPI KKMRQMIKRM LKKKIHPDVD ATKALKKDVP YKPTRNCEAL ESHYLLKIQD CVA
101: KNVDQESDPL ISVENKFYDH HEDVGNLYVQ ADTDHFGSIK TAETPAVTAA AEAEIEPQKK RTTLAELFME DHDKGYDTWH CKKPNNPNLD GEEVKYYKQN
201: GSKLSKRFSF VKKKLVMSKS KEEENDLRPI KKMRQMIKRM LKKKIHPDVD ATKALKKDVP YKPTRNCEAL ESHYLLKIQD CVA
Arabidopsis Description
unknown protein; Has 19 Blast hits to 19 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). [Source:TAIR;Acc:AT2G46640]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.