Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P18680_001 | Banana | cytosol, nucleus, plastid | 55.65 | 45.55 |
| Zm00001d006184_P001 | Maize | mitochondrion | 32.61 | 28.52 |
| TraesCS5B01G316900.1 | Wheat | nucleus | 31.74 | 28.08 |
| TraesCS5D01G322600.1 | Wheat | nucleus | 31.74 | 28.08 |
| TraesCS5A01G316400.1 | Wheat | nucleus | 31.74 | 27.76 |
| KXG36047 | Sorghum | cytosol | 30.43 | 26.52 |
| Os09t0529300-01 | Rice | mitochondrion | 25.65 | 19.28 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P12470_001 | EnsemblPlants:GSMUA_Achr3T12470_001 | EnsemblPlantsGene:GSMUA_Achr3G12470_001 | PANTHER:PTHR38366 | SEG:seg | UniParc:UPI00029533A2 |
| UniProt:M0SE14 | MapMan:35.2 | : | : | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G12470_001]
Coordinates
chr3:+:9247473..9248734
Molecular Weight (calculated)
26168.2 Da
IEP (calculated)
7.151
GRAVY (calculated)
-0.861
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRKLHPSVK YSQVSRKKDD EEKQEVVFEG LMEKEPLLLH DVLDGILTIG TLGHQGNFLS RSYSIQEDHL LQEDEADTEV EEREEGTEVA PAIIESIKVK
101: LPVEAEVKEV TVVVKDVEES PLLEEDKKKR ERGRTTLADL FAAENLNEGA NANRERKKTA KTKKQEKRTS PCTANAKAKA NTTTNTKLQK LMTKMLKKKI
201: HPEIAVMPKS SETQTQETRS HCWQTYTLSL
101: LPVEAEVKEV TVVVKDVEES PLLEEDKKKR ERGRTTLADL FAAENLNEGA NANRERKKTA KTKKQEKRTS PCTANAKAKA NTTTNTKLQK LMTKMLKKKI
201: HPEIAVMPKS SETQTQETRS HCWQTYTLSL
0001: MAELGQQTVD FSALVGRAAE ESFLSFKELV DKSKSTELSD TEKKVSLLKY VAKTQQRMLR LNALAKWCKQ VPLINYFQDL GSTLSAHDIC FTQAADSLFF
0101: MHEGLQQARA PVYDVPSAVE ILLTGSYQRL PKCLDDVGMQ SSLDEHQQKP ALRKLEVLVR SKLLEITLPK EITEVKISKG TVTLSVDGEF KVLVTLGYRG
0201: HLSMWRILHL DLLVGERSGP IKLEVTRRHI LGDDLERRMS VAENPFTILY AVLHELCVAI VMDTVIRQVR ALLQGRWKDA IRFDLISDTG TTPANQEGEA
0301: DSVSLRTPGM KLFYWSDSDK NSGPFIKIEP GSDLQIKCSH STFVIDPLTG KEAEFSLDQS CIDVEKLLLK AICCNRYTRL LEIQKELLRN TRICRTPSDV
0401: ILQALLDEPG IEGDNMVDSK ERVEPEVLRV RAYGSSFFTL GINIRTGRFL LQSSKSILTS SILEEFEDAL NQGSISAVDA FINLRSKSIL HFFAAIGKFL
0501: GLEVYEHGFG INKVPKSLLD GSSILTLGFP DCESSHLLLM ELEKDFTPLF KLLETQMDGS GKPQSFNDPS NILRAKKIDI GQIRILEDDL NLITSDVVKF
0601: VSSFSDAEGI NQASGHRQPG LVDEALTEMS GSQLSFSSVV DGVFGLQKVT SALMSIDGHG LVPKNLSAVT GHGKAPMLTS YHSDSLYNRQ GPLQSSSYNM
0701: LSSPPGKGSA MKKIAISNSD QELSLILSPS LSTGNGVSES GSRLVTESSL SPLPLSQTAD LATSSAGPLL RKDQKPRKRS ASDLLRLIPS LQVVEGVASP
0801: NKRRKTSELV QSELVKSWSP ASQTLSTAVS TSTKTIGCSY GNLIAEANKG NAPSSVFVYA LLHVVRHSSL SIKHAKLTSQ MEALDIQYVE EMGLRDAFSD
0901: IWFRLPFAQN DSWQHICLQL GRPGSMCWDV KINDQHFRDL WELQKGSKTT PWGSGVHIAN SSDVDSHIRY DPEGVVLSYQ SVEADSIKKL VADIQRLSNA
1001: RMFSLGMRKL LGIKPDEKTE ECSANSTMKG STGGKGSGEP VDRWRAFKIE AVGLTSLWFS FGSGVLARFV VEWESGKDGC TMHVSPDQLW PHTKFLEDFI
1101: NGAEVESLLD CIRLTAGPLH ALAAATRPAR ASTATGMPVV PATASSRQSN QIQQTQGIIA PSTLAAPNAT GQSASATSGN TVASSAPSPL GGGFHGVAML
1201: AAAGRSGPGI VPSSLLPIDV SVVLRGPYWI RIIYRKRFAV DMRCFAGDQV WLQPATPPKG GASIGGSLPC PQFRPFIMEH VAQELNGLEP NLTGSQGATN
1301: PNSGNPTVNG VNRVNFSPSS ARAAMNRVAS VASGSLVVSS GLPVRRTPGT AVPAHVRGEL NTAIIGLGDD GGYGGGWVPL VALKKVLRGI LKYLGVLWLF
1401: AQLPDLLREI LGSILKDNEG ALLNLDQEQP ALRFFVGGYV FAVSVHRVQL LLQVLSVRRF HHQAQQNGSS AAAQEELTQS EIGEICDYFS RRVASEPYDA
1501: SRVASFITLL TLPISVLREF LKLIAWKKGL SQSQQAGEIA PAQRPRIELC LENHSGTDLD NNCAAKSNIH YDRPHNTVDF ALTVVLDPVH IPHINAAGGA
1601: AWLPYCVSVR LRYTFGENPS VTFLGMEGSH GGRACWQRVD DWEKCKQRVS RTVEVNGSAA GDLTQGKLKL VADSVQRTLH LCLQGLREGG NNNNNTHQKE
1701: FTI
0101: MHEGLQQARA PVYDVPSAVE ILLTGSYQRL PKCLDDVGMQ SSLDEHQQKP ALRKLEVLVR SKLLEITLPK EITEVKISKG TVTLSVDGEF KVLVTLGYRG
0201: HLSMWRILHL DLLVGERSGP IKLEVTRRHI LGDDLERRMS VAENPFTILY AVLHELCVAI VMDTVIRQVR ALLQGRWKDA IRFDLISDTG TTPANQEGEA
0301: DSVSLRTPGM KLFYWSDSDK NSGPFIKIEP GSDLQIKCSH STFVIDPLTG KEAEFSLDQS CIDVEKLLLK AICCNRYTRL LEIQKELLRN TRICRTPSDV
0401: ILQALLDEPG IEGDNMVDSK ERVEPEVLRV RAYGSSFFTL GINIRTGRFL LQSSKSILTS SILEEFEDAL NQGSISAVDA FINLRSKSIL HFFAAIGKFL
0501: GLEVYEHGFG INKVPKSLLD GSSILTLGFP DCESSHLLLM ELEKDFTPLF KLLETQMDGS GKPQSFNDPS NILRAKKIDI GQIRILEDDL NLITSDVVKF
0601: VSSFSDAEGI NQASGHRQPG LVDEALTEMS GSQLSFSSVV DGVFGLQKVT SALMSIDGHG LVPKNLSAVT GHGKAPMLTS YHSDSLYNRQ GPLQSSSYNM
0701: LSSPPGKGSA MKKIAISNSD QELSLILSPS LSTGNGVSES GSRLVTESSL SPLPLSQTAD LATSSAGPLL RKDQKPRKRS ASDLLRLIPS LQVVEGVASP
0801: NKRRKTSELV QSELVKSWSP ASQTLSTAVS TSTKTIGCSY GNLIAEANKG NAPSSVFVYA LLHVVRHSSL SIKHAKLTSQ MEALDIQYVE EMGLRDAFSD
0901: IWFRLPFAQN DSWQHICLQL GRPGSMCWDV KINDQHFRDL WELQKGSKTT PWGSGVHIAN SSDVDSHIRY DPEGVVLSYQ SVEADSIKKL VADIQRLSNA
1001: RMFSLGMRKL LGIKPDEKTE ECSANSTMKG STGGKGSGEP VDRWRAFKIE AVGLTSLWFS FGSGVLARFV VEWESGKDGC TMHVSPDQLW PHTKFLEDFI
1101: NGAEVESLLD CIRLTAGPLH ALAAATRPAR ASTATGMPVV PATASSRQSN QIQQTQGIIA PSTLAAPNAT GQSASATSGN TVASSAPSPL GGGFHGVAML
1201: AAAGRSGPGI VPSSLLPIDV SVVLRGPYWI RIIYRKRFAV DMRCFAGDQV WLQPATPPKG GASIGGSLPC PQFRPFIMEH VAQELNGLEP NLTGSQGATN
1301: PNSGNPTVNG VNRVNFSPSS ARAAMNRVAS VASGSLVVSS GLPVRRTPGT AVPAHVRGEL NTAIIGLGDD GGYGGGWVPL VALKKVLRGI LKYLGVLWLF
1401: AQLPDLLREI LGSILKDNEG ALLNLDQEQP ALRFFVGGYV FAVSVHRVQL LLQVLSVRRF HHQAQQNGSS AAAQEELTQS EIGEICDYFS RRVASEPYDA
1501: SRVASFITLL TLPISVLREF LKLIAWKKGL SQSQQAGEIA PAQRPRIELC LENHSGTDLD NNCAAKSNIH YDRPHNTVDF ALTVVLDPVH IPHINAAGGA
1601: AWLPYCVSVR LRYTFGENPS VTFLGMEGSH GGRACWQRVD DWEKCKQRVS RTVEVNGSAA GDLTQGKLKL VADSVQRTLH LCLQGLREGG NNNNNTHQKE
1701: FTI
Arabidopsis Description
MED14Mediator of RNA polymerase II transcription subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR02]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.