Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG36047 | Sorghum | cytosol | 87.83 | 87.5 |
| TraesCS5D01G322600.1 | Wheat | nucleus | 63.5 | 64.23 |
| TraesCS5B01G316900.1 | Wheat | nucleus | 63.12 | 63.85 |
| TraesCS5A01G316400.1 | Wheat | nucleus | 61.98 | 61.98 |
| Os09t0529300-01 | Rice | mitochondrion | 52.47 | 45.1 |
| GSMUA_Achr3P12470_001 | Banana | nucleus | 28.52 | 32.61 |
| GSMUA_Achr1P18680_001 | Banana | cytosol, nucleus, plastid | 28.14 | 26.33 |
Protein Annotations
| EMBL:BT083984 | EMBL:GQ450293 | EnsemblPlants:Zm00001d006184_P001 | EnsemblPlants:Zm00001d006184_T001 | EnsemblPlantsGene:Zm00001d006184 | EntrezGene:100277053 |
| PANTHER:PTHR38366 | ProteinID:ONM23008.1 | SEG:seg | UniParc:UPI0001A4C2E7 | UniProt:C4IZI7 | MapMan:35.2 |
Description
Leaf angle-associated protein [Source:UniProtKB/TrEMBL;Acc:C4IZI7]
Coordinates
chr2:+:200972420..200977073
Molecular Weight (calculated)
29579.5 Da
IEP (calculated)
5.267
GRAVY (calculated)
-0.453
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLKVFHWLN RRMHSNTEYC SIHGSKAMED KDSVPHSVVE KDTEALLLHD VLLNGILAIG TLGHHVDSLC PVACIEEDDL FIMDDEKAIV EERDDEEPRN
101: DQVKEDVALE TEPCEPVWPI VEPAKMHSLS MKEDNFTCFV AEEILIREVE DGGGANIQER PLLMLEKVEK VRTTLADLFA AEVFSSSSPR EYSCQDIIDV
201: AVASTSKHAS CMEKMHQKKP RKPTPKPLKA TRKLSRVMRK MLGKKIHPEQ LNGRSNAEGP LTA
101: DQVKEDVALE TEPCEPVWPI VEPAKMHSLS MKEDNFTCFV AEEILIREVE DGGGANIQER PLLMLEKVEK VRTTLADLFA AEVFSSSSPR EYSCQDIIDV
201: AVASTSKHAS CMEKMHQKKP RKPTPKPLKA TRKLSRVMRK MLGKKIHPEQ LNGRSNAEGP LTA
001: MTIFNWVQKK LHQNVIKDGV RKNEKKKRNE GISEIEKNTK AILDQVGLVD ALDNWFDGVL TIGTFGFDTL NFKEEDEMDD DECGSGDLDY VVIDGSIIKN
101: VDQESDPLIS VENKFYDHHE DVGNLYVQAD TDHFGSIKTA ETPAVTAAAE AEIEPQKKRT TLAELFMEDH DKGYDTWHCK KPNNPNLDGE EVKYYKQNGS
201: KLSKRFSFVK KKLVMSKSKE EENDLRPIKK MRQMIKRMLK KKIHPDVDAT KALKKDVPYK PTRNCEALES HYLLKIQDCV A
101: VDQESDPLIS VENKFYDHHE DVGNLYVQAD TDHFGSIKTA ETPAVTAAAE AEIEPQKKRT TLAELFMEDH DKGYDTWHCK KPNNPNLDGE EVKYYKQNGS
201: KLSKRFSFVK KKLVMSKSKE EENDLRPIKK MRQMIKRMLK KKIHPDVDAT KALKKDVPYK PTRNCEALES HYLLKIQDCV A
Arabidopsis Description
unknown protein; Has 19 Blast hits to 19 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). [Source:TAIR;Acc:AT2G46640]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.