Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d006184_P001 | Maize | mitochondrion | 87.5 | 87.83 |
| TraesCS5D01G322600.1 | Wheat | nucleus | 65.15 | 66.15 |
| TraesCS5B01G316900.1 | Wheat | nucleus | 64.39 | 65.38 |
| TraesCS5A01G316400.1 | Wheat | nucleus | 63.64 | 63.88 |
| Os09t0529300-01 | Rice | mitochondrion | 52.27 | 45.1 |
| GSMUA_Achr3P12470_001 | Banana | nucleus | 26.52 | 30.43 |
| GSMUA_Achr1P18680_001 | Banana | cytosol, nucleus, plastid | 28.41 | 26.69 |
Protein Annotations
| EnsemblPlants:KXG36047 | EnsemblPlantsGene:SORBI_3002G272400 | PANTHER:PTHR38366 | ProteinID:KXG36047 | ProteinID:KXG36047.1 | SEG:seg |
| UniParc:UPI0001C80DDF | UniProt:A0A1B6QDQ1 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:65535293..65539815
Molecular Weight (calculated)
29668.6 Da
IEP (calculated)
4.947
GRAVY (calculated)
-0.473
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLKVFHWLN WRMHPNTEYC TIHGNKAMED REDSVPHSVV EKDTEALLLR DVLLNGILAI GTLGHHVDSF CPEACIEEED LLVMGDERVI EEDIDDEEPR
101: NDQVKEDVAL ETEPCEPVLP IVEPAKMHSL SMKEDNFTCF VTEEILMREV EDGGAVNIQE RPLLMVEKVE KVRTTLADLF AAEVFSSSAP GENSCQDIIH
201: VAGASTSKHT SCMDKMHQKK PRKPPPKPLK ATRKLSRVMR KMLGKKIHPE QLNGRSNAEG PLTA
101: NDQVKEDVAL ETEPCEPVLP IVEPAKMHSL SMKEDNFTCF VTEEILMREV EDGGAVNIQE RPLLMVEKVE KVRTTLADLF AAEVFSSSAP GENSCQDIIH
201: VAGASTSKHT SCMDKMHQKK PRKPPPKPLK ATRKLSRVMR KMLGKKIHPE QLNGRSNAEG PLTA
001: MTIFNWVQKK LHQNVIKEID GVRKNEKKKR NEGISEIEKN TKAILDQVGL VDALDNWFDG VLTIGTFGFD TLNFKEEDEM DDDECGSGDL DYVVIDGSII
101: KNVDQESDPL ISVENKFYDH HEDVGNLYVQ ADTDHFGSIK TAETPAVTAA AEAEIEPQKK RTTLAELFME DHDKGYDTWH CKKPNNPNLD GEEVKYYKQN
201: GSKLSKRFSF VKKKLVMSKS KEEENDLRPI KKMRQMIKRM LKKKIHPDVD ATKALKKDVP YKPTRNCEAL ESHYLLKIQG LYFLIILV
101: KNVDQESDPL ISVENKFYDH HEDVGNLYVQ ADTDHFGSIK TAETPAVTAA AEAEIEPQKK RTTLAELFME DHDKGYDTWH CKKPNNPNLD GEEVKYYKQN
201: GSKLSKRFSF VKKKLVMSKS KEEENDLRPI KKMRQMIKRM LKKKIHPDVD ATKALKKDVP YKPTRNCEAL ESHYLLKIQG LYFLIILV
Arabidopsis Description
unknown protein; Has 19 Blast hits to 19 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). [Source:TAIR;Acc:AT2G46640]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.