Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P24680_001 | Banana | nucleus | 42.19 | 68.07 |
| GSMUA_Achr6P04440_001 | Banana | nucleus | 54.69 | 60.34 |
| GSMUA_Achr4P05510_001 | Banana | nucleus | 23.96 | 50.0 |
| GSMUA_Achr1P15350_001 | Banana | nucleus | 25.0 | 40.34 |
| GSMUA_Achr4P12070_001 | Banana | nucleus | 25.52 | 38.58 |
| GSMUA_Achr5P12530_001 | Banana | nucleus | 36.98 | 35.5 |
| GSMUA_Achr6P27040_001 | Banana | nucleus | 28.65 | 32.35 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 33.33 | 31.22 |
| GSMUA_Achr3P15550_001 | Banana | nucleus | 29.17 | 30.6 |
| GSMUA_Achr11P... | Banana | nucleus | 29.69 | 30.0 |
| GSMUA_Achr11P... | Banana | nucleus | 40.1 | 28.73 |
| GSMUA_Achr1P00480_001 | Banana | nucleus | 28.65 | 28.06 |
| GSMUA_Achr7P06910_001 | Banana | nucleus | 31.77 | 25.85 |
| GSMUA_Achr2P10490_001 | Banana | nucleus | 31.25 | 25.53 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 40.62 | 23.57 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr2G17810_001 | EnsemblPlants:GSMUA_Achr2P17810_001 | EnsemblPlants:GSMUA_Achr2T17810_001 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0S8X2 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00029631D1 | SEG:seg | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G17810_001]
Coordinates
chr2:+:18261924..18262502
Molecular Weight (calculated)
20808.7 Da
IEP (calculated)
10.540
GRAVY (calculated)
-0.492
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMHPDLAYL EIIRRYLLEE ELTTTTTTSG ADGGSSNEPP NAVTKVAPPQ QQMPPQRTAR ERGRNYRGVR QRPWGKYAAE IRDPGRNGAR LWLGTFETAE
101: AAAMAYDRAA FRIRGSRALL NFPLLVSSQD AAAKRAATET PLVGTNKRRK GVAVSVSSAG SELTVQKNRS GLETSSGLLI LGSELATTVG HI
101: AAAMAYDRAA FRIRGSRALL NFPLLVSSQD AAAKRAATET PLVGTNKRRK GVAVSVSSAG SELTVQKNRS GLETSSGLLI LGSELATTVG HI
001: MSMTADSQSD YAFLESIRRH LLGESEPILS ESTASSVTQS CVTGQSIKPV YGRNPSFSKL YPCFTESWGD LPLKENDSED MLVYGILNDA FHGGWEPSSS
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
Arabidopsis Description
ERF1AEthylene-responsive transcription factor 1A [Source:UniProtKB/Swiss-Prot;Acc:O80337]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.