Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P24680_001 | Banana | nucleus | 47.7 | 69.75 |
| GSMUA_Achr2P17810_001 | Banana | nucleus | 60.34 | 54.69 |
| GSMUA_Achr4P05510_001 | Banana | nucleus | 27.59 | 52.17 |
| GSMUA_Achr1P15350_001 | Banana | nucleus | 27.59 | 40.34 |
| GSMUA_Achr4P12070_001 | Banana | nucleus | 29.31 | 40.16 |
| GSMUA_Achr5P12530_001 | Banana | nucleus | 37.36 | 32.5 |
| GSMUA_Achr3P15550_001 | Banana | nucleus | 32.76 | 31.15 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 34.48 | 29.27 |
| GSMUA_Achr6P27040_001 | Banana | nucleus | 27.59 | 28.24 |
| GSMUA_Achr11P... | Banana | nucleus | 42.53 | 27.61 |
| GSMUA_Achr11P... | Banana | nucleus | 29.89 | 27.37 |
| GSMUA_Achr1P00480_001 | Banana | nucleus | 29.89 | 26.53 |
| GSMUA_Achr7P06910_001 | Banana | nucleus | 32.18 | 23.73 |
| GSMUA_Achr2P10490_001 | Banana | nucleus | 30.46 | 22.55 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 42.53 | 22.36 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr6G04440_001 | EnsemblPlants:GSMUA_Achr6P04440_001 | EnsemblPlants:GSMUA_Achr6T04440_001 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0T442 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF41 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000294AEE7 | SEG:seg |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G04440_001]
Coordinates
chr6:-:3032259..3032954
Molecular Weight (calculated)
19105.6 Da
IEP (calculated)
11.722
GRAVY (calculated)
-0.755
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MHVFVPNRKL QRSRAAEGRE GDGCFRRQAV ATLDANGGDS AVFSAVVAPQ RPPPLQARER GRNYRGVRQR PWGKYAAEIR DPGRKGARVW LGTFATAEEA
101: ALAYDRAAFR IRGSRALLNF PLLISSQDDA APPKRASPET PPPSENKRRK RVAAPVSSAG GQREGISESR NFEL
101: ALAYDRAAFR IRGSRALLNF PLLISSQDDA APPKRASPET PPPSENKRRK RVAAPVSSAG GQREGISESR NFEL
001: MATPNEVSAL FLIKKYLLDE LSPLPTTATT NRWMNDFTSF DQTGFEFSEF ETKPEIIDLV TPKPEIFDFD VKSEIPSESN DSFTFQSNPP RVTVQSNRKP
101: PLKIAPPNRT KWIQFATGNP KPELPVPVVA AEEKRHYRGV RMRPWGKFAA EIRDPTRRGT RVWLGTFETA IEAARAYDKE AFRLRGSKAI LNFPLEVDKW
201: NPRAEDGRGL YNKRKRDGEE EEVTVVEKVL KTEESYDVSG GENVESGLTA IDDWDLTEFL SMPLLSPLSP HPPFGYPQLT VV
101: PLKIAPPNRT KWIQFATGNP KPELPVPVVA AEEKRHYRGV RMRPWGKFAA EIRDPTRRGT RVWLGTFETA IEAARAYDKE AFRLRGSKAI LNFPLEVDKW
201: NPRAEDGRGL YNKRKRDGEE EEVTVVEKVL KTEESYDVSG GENVESGLTA IDDWDLTEFL SMPLLSPLSP HPPFGYPQLT VV
Arabidopsis Description
ERF6Ethylene-responsive transcription factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ91]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.