Factsheet for GSMUA_Achr3P15550_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P27040_001	Banana	nucleus	55.74	60.0
VIT_10s0003g00580.t01	Wine grape	nucleus	43.72	52.29
GSMUA_Achr4P05510_001	Banana	nucleus	24.59	48.91
Solyc02g077370.1.1	Tomato	nucleus	42.62	48.45
GSMUA_Achr5P24680_001	Banana	nucleus	31.15	47.9
KRH21338	Soybean	nucleus	37.7	46.94
PGSC0003DMT400027849	Potato	nucleus	43.17	43.41
GSMUA_Achr1P15350_001	Banana	nucleus	26.78	41.18
GSMUA_Achr4P12070_001	Banana	nucleus	26.78	38.58
GSMUA_Achr6P04440_001	Banana	nucleus	31.15	32.76
GSMUA_Achr5P12530_001	Banana	nucleus	35.52	32.5
GSMUA_Achr2P17810_001	Banana	nucleus	30.6	29.17
KRH10962	Soybean	nucleus	41.53	28.15
GSMUA_Achr1P00490_001	Banana	nucleus	30.6	27.32
GSMUA_Achr1P00480_001	Banana	nucleus	27.87	26.02
GSMUA_Achr11P...	Banana	nucleus	26.78	25.79
GSMUA_Achr11P...	Banana	nucleus	36.07	24.63
GSMUA_Achr2P10490_001	Banana	nucleus	28.42	22.13
GSMUA_Achr7P06910_001	Banana	nucleus	27.87	21.61
GSMUA_Achr5P21050_001	Banana	nucleus	38.8	21.45

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr3G15550_001	EnsemblPlants:GSMUA_Achr3P15550_001	EnsemblPlants:GSMUA_Achr3T15550_001
InterPro:IPR001471	InterPro:IPR036955	UniProt:M0SEX1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31190	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002958A38	SEG:seg	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G15550_001]

Coordinates

chr3:+:16584590..16585141

Molecular Weight (calculated)

19495.8 Da

IEP (calculated)

10.148

GRAVY (calculated)

-0.540

Length

183 amino acids

Sequence
(BLAST)

001: MRIMAGDEDC TQTQLPFNEN DSQDVVLFEV LREASAGPPP PPPLPSSSST SDDSGSGPAR RRAGKYRGVR RRPWGKFAAE IRDSSRHGAR LWLGTFDTAE
101: AAAIAYDRAA FRMRGSKALL NFPLAIALAS GAPAVGRQRI AQGGSDAVPS TVEPQNPRPD HSAGLLEASK AGESTKSVLN RQL

Best Arabidopsis Sequence Match ( AT2G44840.1 )
(BLAST)

001: MSSSDSVNNG VNSRMYFRNP SFSNVILNDN WSDLPLSVDD SQDMAIYNTL RDAVSSGWTP SVPPVTSPAE ENKPPATKAS GSHAPRQKGM QYRGVRRRPW
101: GKFAAEIRDP KKNGARVWLG TYETPEDAAV AYDRAAFQLR GSKAKLNFPH LIGSCKYEPV RIRPRRRSPE PSVSDQLTSE QKRESHVDDG ESSLVVPELD
201: FTVDQFYFDG SLLMDQSECS YSDNRI

Arabidopsis Description

ERF13Ethylene-responsive transcription factor 13 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9K1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.