Factsheet for GSMUA_Achr4P26700_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P15590_001	Banana	cytosol	29.73	25.98
GSMUA_Achr10P...	Banana	cytosol	25.23	13.33
GSMUA_Achr7P03080_001	Banana	cytosol	25.23	13.33
GSMUA_Achr5P15600_001	Banana	cytosol	17.12	12.34
GSMUA_AchrUn_...	Banana	cytosol	12.61	11.48
GSMUA_Achr11P...	Banana	cytosol	21.62	11.37
GSMUA_AchrUn_...	Banana	cytosol	21.62	11.21

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
EnsemblPlantsGene:GSMUA_Achr4G26700_001	EnsemblPlants:GSMUA_Achr4P26700_001	EnsemblPlants:GSMUA_Achr4T26700_001	UniProt:M0SSD2	InterPro:P-loop_NTPase	PFAM:PF00071
PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF879	SUPFAM:SSF52540	InterPro:Small_GTPase
TMHMM:TMhelix	UniParc:UPI000295259F	:	:	:	:

Description

Putative Ras-related protein Rab-19 [Source:GMGC_GENE;Acc:GSMUA_Achr4G26700_001]

Coordinates

chr4:-:25878802..25879917

Molecular Weight (calculated)

12579.1 Da

IEP (calculated)

9.454

GRAVY (calculated)

0.060

Length

111 amino acids

Sequence
(BLAST)

001: MGSSSAESYD YAFKIVLTRD SSVGKTSFTS HFVGGQRPSL GVLTSSSLAF SIFLIRNTKL KLTIWDTDQF ELYRTVTKDY YRCAHGIIMG YPISLLCFHS
101: WFPRSSFIPL N

Best Arabidopsis Sequence Match ( AT1G43890.1 )
(BLAST)

001: MGSSSGQPEF DYLFKVLLIG DSGVGKSSLL LSFTSNTFDD LSPTIGVDFK VKYLTIGEKK LKLAIWDTAG QERFRTLTSS YYRGAQGIIM VYDVTRRDTF
101: TNLSDIWAKE IDLYSTNQDC IKMLVGNKVD KESERAVSKK EGIDFAREYG CLFLECSAKT RVNVEQCFEE LVLKILETPS LTAEGSSGGK KNIFKQNPAQ
201: TTSTSSSYCC SS

Arabidopsis Description

RABC1Ras-related protein RABC1 [Source:UniProtKB/Swiss-Prot;Acc:O23657]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.