Factsheet for GSMUA_Achr11P17100_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	90.52	89.25
TraesCS4B01G310800.1	Wheat	cytosol, extracellular	74.41	75.85
TraesCS4A01G410700.1	Wheat	cytosol, extracellular	73.93	75.36
TraesCS4D01G308700.1	Wheat	cytosol, extracellular	73.46	74.88
EER95509	Sorghum	cytosol	74.41	74.76
Os03t0146000-01	Rice	plasma membrane	72.99	73.33
Os10t0456600-01	Rice	cytosol	74.41	70.72
VIT_08s0007g04740.t01	Wine grape	cytosol	70.62	70.62
KRH67770	Soybean	endoplasmic reticulum	70.14	70.14
KRH19962	Soybean	cytosol	70.14	70.14
TraesCS1B01G158500.1	Wheat	cytosol	72.04	70.05
TraesCS1A01G143100.1	Wheat	cytosol	72.04	70.05
EER91530	Sorghum	cytosol	72.04	70.05
HORVU1Hr1G038070.1	Barley	cytosol	72.04	70.05
KRG96048	Soybean	cytosol	69.67	69.67
AT5G03530.1	Thale cress	cytosol	69.19	69.52
CDX70301	Canola	cytosol	69.19	69.52
CDY10375	Canola	cytosol	69.19	69.52
Bra028830.1-P	Field mustard	cytosol	69.67	69.34
CDY04887	Canola	cytosol	69.67	69.34
CDY44372	Canola	cytosol	69.67	69.34
KRH32565	Soybean	extracellular	69.67	69.34
TraesCS1D01G142000.1	Wheat	cytosol, extracellular	70.14	69.16
Bra009524.1-P	Field mustard	cytosol	68.72	69.05
Solyc09g008460.2.1	Tomato	plastid	70.62	68.98
PGSC0003DMT400009952	Potato	cytosol	70.14	68.52
Solyc10g086310.1.1	Tomato	cytosol	66.82	67.46
CDY11028	Canola	cytosol	27.49	65.91
CDY54608	Canola	cytosol	63.51	65.69
PGSC0003DMT400049302	Potato	cytosol	66.82	65.58
CDY41571	Canola	cytosol	63.03	65.2
AT3G09910.1	Thale cress	cytosol	62.56	64.39
Bra029804.1-P	Field mustard	cytosol	62.09	64.22
Zm00001d032811_P002	Maize	cytosol	74.88	63.97
Zm00001d014097_P002	Maize	cytosol	73.93	63.16
HORVU4Hr1G079250.1	Barley	cytosol, plastid	73.46	62.25
GSMUA_Achr10P...	Banana	cytosol	60.19	60.48
GSMUA_Achr7P03080_001	Banana	cytosol	60.19	60.48
GSMUA_AchrUn_...	Banana	cytosol	33.65	58.2
Zm00001d048393_P001	Maize	plastid	72.99	49.84
GSMUA_Achr5P15600_001	Banana	cytosol	36.02	49.35
GSMUA_Achr4P26700_001	Banana	cytosol	11.37	21.62
GSMUA_Achr5P15590_001	Banana	cytosol	12.32	20.47

Protein Annotations

MapMan:22.8.1.3	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr11G17100_001	EnsemblPlants:GSMUA_Achr11P17100_001	EnsemblPlants:GSMUA_Achr11T17100_001
UniProt:M0RSZ0	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF879	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000294CDB1	:	:

Description

GTP-binding protein yptV3 [Source:GMGC_GENE;Acc:GSMUA_Achr11G17100_001]

Coordinates

chr11:+:18745387..18752593

Molecular Weight (calculated)

23430.1 Da

IEP (calculated)

7.006

GRAVY (calculated)

-0.227

Length

211 amino acids

Sequence
(BLAST)

001: MGSSSGPGHG YDYAFKILLI GDSGVGKSSL LVSFISNHLA DDLSPTIGVD FKIKHLAVGD EKLKLTIWDT AGQERFRTLT SSYYRGSQGI ILVYDVTKRE
101: TFTNLADVWV KEVELYSTNR NCVKVLVGNK VDKEADRMVT REEGIAFANE YGCLFIECSA KTRANVEKCF EELALKIMEV PKLVEEGSVP VKRNILKQKQ
201: EQHAHQGGCC S

Best Arabidopsis Sequence Match ( AT5G03530.1 )
(BLAST)

001: MGSSSGQSGY DLSFKILLIG DSGVGKSSLL VSFISSSVED LAPTIGVDFK IKQLTVGGKR LKLTIWDTAG QERFRTLTSS YYRGAQGIIL VYDVTRRETF
101: TNLVDVWGKE IELYSTNQEC VRMLVGNKVD RESERGVSRE EGIALAKELN CMFLECSART RQNVEQCFEE LALKIMEVPS LLEEGSSAVK RNILKQKPEH
201: QTNTQSGCCS

Arabidopsis Description

RABC2ARABC2A [Source:UniProtKB/TrEMBL;Acc:A0A178UJG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.