Factsheet for HORVU1Hr1G038070.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, plastid
iPSORT:	plastid
MultiLoc:	cytosol
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G158500.1	Wheat	cytosol	98.62	98.62
TraesCS1A01G143100.1	Wheat	cytosol	98.16	98.16
TraesCS1D01G142000.1	Wheat	cytosol, extracellular	92.63	93.93
EER91530	Sorghum	cytosol	84.33	84.33
Os10t0456600-01	Rice	cytosol	85.71	83.78
Zm00001d032811_P002	Maize	cytosol	86.64	76.11
Zm00001d014097_P002	Maize	cytosol	85.25	74.9
GSMUA_Achr11P...	Banana	cytosol	70.05	72.04
GSMUA_AchrUn_...	Banana	cytosol	70.05	71.03
KRH19962	Soybean	cytosol	65.9	67.77
Solyc09g008460.2.1	Tomato	plastid	67.28	67.59
HORVU4Hr1G079250.1	Barley	cytosol, plastid	76.96	67.07
PGSC0003DMT400009952	Potato	cytosol	66.36	66.67
KRH32565	Soybean	extracellular	64.98	66.51
VIT_08s0007g04740.t01	Wine grape	cytosol	64.52	66.35
KRH67770	Soybean	endoplasmic reticulum	64.06	65.88
CDX70301	Canola	cytosol	63.59	65.71
CDY10375	Canola	cytosol	63.59	65.71
Bra028830.1-P	Field mustard	cytosol	64.06	65.57
CDY44372	Canola	cytosol	64.06	65.57
CDY04887	Canola	cytosol	64.06	65.57
KRG96048	Soybean	cytosol	63.59	65.4
AT5G03530.1	Thale cress	cytosol	63.13	65.24
Bra009524.1-P	Field mustard	cytosol	63.13	65.24
CDY11028	Canola	cytosol	26.27	64.77
Solyc10g086310.1.1	Tomato	cytosol	62.21	64.59
PGSC0003DMT400049302	Potato	cytosol	63.59	64.19
AT3G09910.1	Thale cress	cytosol	59.91	63.41
CDY41571	Canola	cytosol	59.45	63.24
CDY54608	Canola	cytosol	58.99	62.75
Bra029804.1-P	Field mustard	cytosol	58.53	62.25
HORVU2Hr1G127540.1	Barley	cytosol	57.14	57.41
HORVU2Hr1G127520.1	Barley	cytosol	57.14	57.41
HORVU1Hr1G025450.1	Barley	endoplasmic reticulum	27.19	41.55

Protein Annotations

MapMan:22.8.1.3	Gene3D:3.40.50.300	UniProt:A0A287F603	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:HORVU1Hr1G038070	EnsemblPlants:HORVU1Hr1G038070.1
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF879
SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SMART:SM00177	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000B46A95C	:	:

Description

No Description!

Coordinates

chrchr1H:-:261768310..261777353

Molecular Weight (calculated)

23721.3 Da

IEP (calculated)

5.164

GRAVY (calculated)

-0.193

Length

217 amino acids

Sequence
(BLAST)

001: MGVSPVSPGA SAGYECSFKI LLIGDSGVGK SSLLLSFVAA ANLDDDIAPT IGVDFKIKFL TVGGKKLKLT IWDTAGQERF RTITSSYYRG AQGIILVYDV
101: AKRESFTNLG DVWTKEIDSN SSNKDCIKML VGNKVDKDDE RTVTREEGLA FAQESGCLFL ESSAKTRENV ENCFEELVLK ILEVPSLLEE GSSSVVKRNI
201: LKQQQESHAK YGGRCCQ

Best Arabidopsis Sequence Match ( AT5G03530.1 )
(BLAST)

001: MGSSSGQSGY DLSFKILLIG DSGVGKSSLL VSFISSSVED LAPTIGVDFK IKQLTVGGKR LKLTIWDTAG QERFRTLTSS YYRGAQGIIL VYDVTRRETF
101: TNLVDVWGKE IELYSTNQEC VRMLVGNKVD RESERGVSRE EGIALAKELN CMFLECSART RQNVEQCFEE LALKIMEVPS LLEEGSSAVK RNILKQKPEH
201: QTNTQSGCCS

Arabidopsis Description

RABC2ARABC2A [Source:UniProtKB/TrEMBL;Acc:A0A178UJG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.