Factsheet for HORVU4Hr1G079250.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G308700.1	Wheat	cytosol, extracellular	81.93	98.55
TraesCS4B01G310800.1	Wheat	cytosol, extracellular	81.93	98.55
TraesCS4A01G410700.1	Wheat	cytosol, extracellular	81.93	98.55
EER95509	Sorghum	cytosol	74.3	88.1
Os03t0146000-01	Rice	plasma membrane	72.69	86.19
HORVU1Hr1G038070.1	Barley	cytosol	67.07	76.96
GSMUA_Achr11P...	Banana	cytosol	62.25	73.46
GSMUA_AchrUn_...	Banana	cytosol	62.25	72.43
VIT_08s0007g04740.t01	Wine grape	cytosol	57.43	67.77
KRH19962	Soybean	cytosol	56.63	66.82
KRH32565	Soybean	extracellular	56.63	66.51
AT5G03530.1	Thale cress	cytosol	55.42	65.71
CDX70301	Canola	cytosol	55.42	65.71
Bra009524.1-P	Field mustard	cytosol	55.02	65.24
CDY10375	Canola	cytosol	55.02	65.24
CDY04887	Canola	cytosol	55.42	65.09
CDY44372	Canola	cytosol	55.02	64.62
Bra028830.1-P	Field mustard	cytosol	55.02	64.62
KRH67770	Soybean	endoplasmic reticulum	54.62	64.45
KRG96048	Soybean	cytosol	54.62	64.45
Solyc09g008460.2.1	Tomato	plastid	55.42	63.89
PGSC0003DMT400009952	Potato	cytosol	55.02	63.43
Zm00001d048393_P001	Maize	plastid	77.11	62.14
Solyc10g086310.1.1	Tomato	cytosol	51.81	61.72
PGSC0003DMT400049302	Potato	cytosol	53.01	61.4
CDY54608	Canola	cytosol	50.2	61.27
AT3G09910.1	Thale cress	cytosol	50.2	60.98
CDY41571	Canola	cytosol	49.8	60.78
CDY11028	Canola	cytosol	21.29	60.23
Bra029804.1-P	Field mustard	cytosol	48.59	59.31
HORVU2Hr1G127540.1	Barley	cytosol	48.19	55.56
HORVU2Hr1G127520.1	Barley	cytosol	48.19	55.56
HORVU1Hr1G025450.1	Barley	endoplasmic reticulum	22.49	39.44

Protein Annotations

MapMan:22.8.1.3	Gene3D:3.40.50.300	UniProt:A0A287PSS9	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:HORVU4Hr1G079250	EnsemblPlants:HORVU4Hr1G079250.1
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF879
SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000B46B710	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr4H:-:611627598..611633156

Molecular Weight (calculated)

27144.4 Da

IEP (calculated)

8.045

GRAVY (calculated)

-0.316

Length

249 amino acids

Sequence
(BLAST)

001: SPSPPSLYSL PLPSSSQNLH PTNPPARTRA IRSPPPRPGA AAMGSTPGSS YDCSFKVLLI GDSAVGKSSL LVSFVSAAPT DDDISPTIGV DFKIKFLTVG
101: DKKLKLTIWD TAGQERFRTI TSSYYRGAHG IILVYDVTKR QSFTNLADVW AKEIELHSTN KECVKMLVGN KLDKDEDRMV TTEEGLAFAQ QCGCLFLESS
201: AKTRENVEKC FEELVLKILE VPSLSEEGSS VVKRNSLKQK HEKSGGCCQ

Best Arabidopsis Sequence Match ( AT5G03530.1 )
(BLAST)

001: MGSSSGQSGY DLSFKILLIG DSGVGKSSLL VSFISSSVED LAPTIGVDFK IKQLTVGGKR LKLTIWDTAG QERFRTLTSS YYRGAQGIIL VYDVTRRETF
101: TNLVDVWGKE IELYSTNQEC VRMLVGNKVD RESERGVSRE EGIALAKELN CMFLECSART RQNVEQCFEE LALKIMEVPS LLEEGSSAVK RNILKQKPEH
201: QTNTQSGCCS

Arabidopsis Description

RABC2ARABC2A [Source:UniProtKB/TrEMBL;Acc:A0A178UJG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.