Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10375 | Canola | cytosol | 96.67 | 96.67 |
| CDX70301 | Canola | cytosol | 94.76 | 94.76 |
| CDY11028 | Canola | cytosol | 39.52 | 94.32 |
| Bra009524.1-P | Field mustard | cytosol | 94.29 | 94.29 |
| Bra028830.1-P | Field mustard | cytosol | 92.86 | 91.98 |
| CDY04887 | Canola | cytosol | 92.86 | 91.98 |
| CDY44372 | Canola | cytosol | 92.38 | 91.51 |
| VIT_08s0007g04740.t01 | Wine grape | cytosol | 87.62 | 87.2 |
| KRH19962 | Soybean | cytosol | 83.33 | 82.94 |
| KRH32565 | Soybean | extracellular | 83.33 | 82.55 |
| KRH67770 | Soybean | endoplasmic reticulum | 82.86 | 82.46 |
| KRG96048 | Soybean | cytosol | 82.38 | 81.99 |
| AT3G09910.1 | Thale cress | cytosol | 79.52 | 81.46 |
| Solyc09g008460.2.1 | Tomato | plastid | 83.33 | 81.02 |
| PGSC0003DMT400009952 | Potato | cytosol | 82.86 | 80.56 |
| Solyc10g086310.1.1 | Tomato | cytosol | 79.05 | 79.43 |
| PGSC0003DMT400049302 | Potato | cytosol | 80.0 | 78.14 |
| AT1G43890.1 | Thale cress | cytosol | 71.9 | 71.23 |
| GSMUA_Achr11P... | Banana | cytosol | 69.52 | 69.19 |
| Os03t0146000-01 | Rice | plasma membrane | 69.05 | 69.05 |
| GSMUA_AchrUn_... | Banana | cytosol | 70.0 | 68.69 |
| EER95509 | Sorghum | cytosol | 68.1 | 68.1 |
| TraesCS4B01G310800.1 | Wheat | cytosol, extracellular | 66.67 | 67.63 |
| TraesCS4A01G410700.1 | Wheat | cytosol, extracellular | 66.19 | 67.15 |
| EER91530 | Sorghum | cytosol | 69.05 | 66.82 |
| TraesCS4D01G308700.1 | Wheat | cytosol, extracellular | 65.71 | 66.67 |
| TraesCS1D01G142000.1 | Wheat | cytosol, extracellular | 66.19 | 64.95 |
| Os10t0456600-01 | Rice | cytosol | 67.14 | 63.51 |
| HORVU1Hr1G038070.1 | Barley | cytosol | 65.24 | 63.13 |
| TraesCS1B01G158500.1 | Wheat | cytosol | 65.24 | 63.13 |
| TraesCS1A01G143100.1 | Wheat | cytosol | 65.24 | 63.13 |
| Zm00001d032811_P002 | Maize | cytosol | 68.1 | 57.89 |
| Zm00001d014097_P002 | Maize | cytosol | 67.62 | 57.49 |
| HORVU4Hr1G079250.1 | Barley | cytosol, plastid | 65.71 | 55.42 |
| Zm00001d048393_P001 | Maize | plastid | 67.14 | 45.63 |
Protein Annotations
| MapMan:22.8.1.3 | Gene3D:3.40.50.300 | EntrezGene:831810 | UniProt:A0A178UJG3 | ProteinID:AED90619.1 | EMBL:AK119027 |
| ProteinID:ANM70568.1 | ArrayExpress:AT5G03530 | EnsemblPlantsGene:AT5G03530 | RefSeq:AT5G03530 | TAIR:AT5G03530 | RefSeq:AT5G03530-TAIR-G |
| EnsemblPlants:AT5G03530.1 | TAIR:AT5G03530.1 | Symbol:ATRAB ALPHA | EMBL:BT006101 | ProteinID:CAB83314.1 | EMBL:D89824 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 |
| GO:GO:0005794 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0030742 | GO:GO:0080115 | RefSeq:NP_001332165.1 | RefSeq:NP_568121.1 | UniProt:O49841 |
| ProteinID:OAO92891.1 | InterPro:P-loop_NTPase | PFAM:PF00071 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR00449 | ScanProsite:PS00675 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF579 | SMART:SM00173 |
| SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Sigma_54_int_dom_ATP-bd_1 |
| InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI00000AC1A1 | SEG:seg | : |
Description
RABC2ARABC2A [Source:UniProtKB/TrEMBL;Acc:A0A178UJG3]
Coordinates
chr5:-:885437..887564
Molecular Weight (calculated)
23306.9 Da
IEP (calculated)
6.036
GRAVY (calculated)
-0.251
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSSGQSGY DLSFKILLIG DSGVGKSSLL VSFISSSVED LAPTIGVDFK IKQLTVGGKR LKLTIWDTAG QERFRTLTSS YYRGAQGIIL VYDVTRRETF
101: TNLVDVWGKE IELYSTNQEC VRMLVGNKVD RESERGVSRE EGIALAKELN CMFLECSART RQNVEQCFEE LALKIMEVPS LLEEGSSAVK RNILKQKPEH
201: QTNTQSGCCS
101: TNLVDVWGKE IELYSTNQEC VRMLVGNKVD RESERGVSRE EGIALAKELN CMFLECSART RQNVEQCFEE LALKIMEVPS LLEEGSSAVK RNILKQKPEH
201: QTNTQSGCCS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.