Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14967 | Canola | cytosol | 98.58 | 98.58 |
| CDY35803 | Canola | cytosol | 98.58 | 98.58 |
| Bra034924.1-P | Field mustard | cytosol | 98.11 | 98.11 |
| Bra036934.1-P | Field mustard | cytosol | 97.64 | 97.64 |
| Bra032196.1-P | Field mustard | cytosol | 97.17 | 96.71 |
| CDY43856 | Canola | cytosol | 97.17 | 96.71 |
| CDY47787 | Canola | cytosol | 96.7 | 96.7 |
| CDY51571 | Canola | cytosol | 41.04 | 96.67 |
| CDY69246 | Canola | cytosol | 67.45 | 91.67 |
| GSMUA_Achr10P... | Banana | cytosol | 86.32 | 87.14 |
| GSMUA_Achr7P03080_001 | Banana | cytosol | 83.49 | 84.29 |
| KRH43557 | Soybean | cytosol | 83.02 | 84.21 |
| KRH59573 | Soybean | endoplasmic reticulum | 83.02 | 84.21 |
| EES13169 | Sorghum | cytosol | 83.49 | 82.33 |
| TraesCS3A01G421700.1 | Wheat | cytosol, golgi | 82.08 | 81.69 |
| KRH64034 | Soybean | cytosol | 79.25 | 81.16 |
| TraesCS2B01G617000.1 | Wheat | cytosol | 83.02 | 81.11 |
| TraesCS2D01G567100.1 | Wheat | cytosol | 83.02 | 81.11 |
| HORVU2Hr1G127540.1 | Barley | cytosol | 82.55 | 81.02 |
| HORVU2Hr1G127520.1 | Barley | cytosol | 82.55 | 81.02 |
| KRH53905 | Soybean | cytosol | 78.3 | 80.19 |
| TraesCSU01G137100.1 | Wheat | cytosol, plastid | 82.55 | 79.91 |
| VIT_18s0001g15090.t01 | Wine grape | plastid | 85.38 | 76.37 |
| AT5G03530.1 | Thale cress | cytosol | 71.23 | 71.9 |
| AT3G09910.1 | Thale cress | cytosol | 65.57 | 67.8 |
| HORVU1Hr1G025450.1 | Barley | endoplasmic reticulum | 39.62 | 59.15 |
| GSMUA_Achr5P15600_001 | Banana | cytosol | 39.15 | 53.9 |
Protein Annotations
| MapMan:22.8.1.3 | Gene3D:3.40.50.300 | EntrezGene:840987 | ProteinID:AAF63103.1 | ProteinID:AAF79660.1 | ProteinID:AEE32003.1 |
| ProteinID:AEE32004.1 | ProteinID:AEE32005.1 | EMBL:AF370263 | EMBL:AK227664 | ArrayExpress:AT1G43890 | EnsemblPlantsGene:AT1G43890 |
| RefSeq:AT1G43890 | TAIR:AT1G43890 | RefSeq:AT1G43890-TAIR-G | EnsemblPlants:AT1G43890.1 | TAIR:AT1G43890.1 | Symbol:ATRAB18 |
| EMBL:AY063080 | EMBL:AY086878 | Unigene:At.24663 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 |
| GO:GO:0016020 | GO:GO:0016787 | RefSeq:NP_001077675.1 | RefSeq:NP_001117435.1 | RefSeq:NP_175056.1 | UniProt:O23657 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF874 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | EMBL:U75603 | UniParc:UPI00000A560A | SEG:seg |
Description
RABC1Ras-related protein RABC1 [Source:UniProtKB/Swiss-Prot;Acc:O23657]
Coordinates
chr1:+:16646696..16648639
Molecular Weight (calculated)
23531.9 Da
IEP (calculated)
5.433
GRAVY (calculated)
-0.276
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSSGQPEF DYLFKVLLIG DSGVGKSSLL LSFTSNTFDD LSPTIGVDFK VKYLTIGEKK LKLAIWDTAG QERFRTLTSS YYRGAQGIIM VYDVTRRDTF
101: TNLSDIWAKE IDLYSTNQDC IKMLVGNKVD KESERAVSKK EGIDFAREYG CLFLECSAKT RVNVEQCFEE LVLKILETPS LTAEGSSGGK KNIFKQNPAQ
201: TTSTSSSYCC SS
101: TNLSDIWAKE IDLYSTNQDC IKMLVGNKVD KESERAVSKK EGIDFAREYG CLFLECSAKT RVNVEQCFEE LVLKILETPS LTAEGSSGGK KNIFKQNPAQ
201: TTSTSSSYCC SS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.