Factsheet for TraesCS2D01G567100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G617000.1	Wheat	cytosol	100.0	100.0
TraesCS3A01G421700.1	Wheat	cytosol, golgi	93.09	94.84
TraesCSU01G137100.1	Wheat	cytosol, plastid	95.39	94.52
EES13169	Sorghum	cytosol	93.09	93.95
HORVU2Hr1G127540.1	Barley	cytosol	91.24	91.67
HORVU2Hr1G127520.1	Barley	cytosol	91.24	91.67
GSMUA_Achr7P03080_001	Banana	cytosol	84.79	87.62
PGSC0003DMT400063864	Potato	cytosol	83.41	86.6
GSMUA_Achr10P...	Banana	cytosol	82.49	85.24
Solyc04g064510.2.1	Tomato	cytosol	81.57	84.69
AT1G43890.1	Thale cress	cytosol	81.11	83.02
CDY14967	Canola	cytosol	81.11	83.02
CDY47787	Canola	cytosol	80.65	82.55
Bra032196.1-P	Field mustard	cytosol	80.65	82.16
CDY43856	Canola	cytosol	80.65	82.16
CDY35803	Canola	cytosol	80.18	82.08
Bra036934.1-P	Field mustard	cytosol	80.18	82.08
Bra034924.1-P	Field mustard	cytosol	79.72	81.6
CDY69246	Canola	cytosol	58.06	80.77
CDY51571	Canola	cytosol	32.72	78.89
VIT_00s1603g00010.t01	Wine grape	cytosol	17.05	61.67
TraesCS4D01G308700.1	Wheat	cytosol, extracellular	55.3	57.97
TraesCS1D01G142000.1	Wheat	cytosol, extracellular	56.22	57.01
VIT_13s0019g05280.t01	Wine grape	cytosol	35.94	47.27
KRH55263	Soybean	cytosol	29.95	45.14
VIT_15s0024g00940.t01	Wine grape	cytosol, endoplasmic reticulum	20.74	31.47
VIT_13s0047g01030.t01	Wine grape	mitochondrion	17.05	28.46

Protein Annotations

MapMan:22.8.1.3	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF874	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SMART:SM00177	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231
EnsemblPlantsGene:TraesCS2D01G567100	EnsemblPlants:TraesCS2D01G567100.1	TIGR:cd01863	SEG:seg	:	:

Description

No Description!

Coordinates

chr2D:+:635787922..635790282

Molecular Weight (calculated)

23886.4 Da

IEP (calculated)

5.148

GRAVY (calculated)

-0.204

Length

217 amino acids

Sequence
(BLAST)

001: MDSSSSSTAS SSQAQPDFDY LFKLLLIGDS GVGKSSLLLR FTSDSFEDLS PTIGVDFKVK MVNIAGKKLK LAVWDTAGQE RFRTLTSSYY RGAQGIIMVY
101: DVTRRETFTN LSDIWAKEID LYSTNQDCIK MLVGNKVDKE SERAVTKKEG IDFAREYGCL FLECSAKTKV NVEQCFEELV LKILDTPSLL ADASSGAKKN
201: IFKQKAPEAD AAASGCC

Best Arabidopsis Sequence Match ( AT1G43890.3 )
(BLAST)

001: MGSSSGQPEF DYLFKVLLIG DSGVGKSSLL LSFTSNTFDD LSPTIGVDFK VKYLTIGEKK LKLAIWDTAG QERFRTLTSS YYRGAQGIIM VYDVTRRDTF
101: TNLSDIWAKE IDLYSTNQDC IKMLVGNKVD KESERAVSKK EGIDFAREYG CLFLECSAKT RVNVEQCFEE LVLKILETPS LTAEGSSGGK KNIFKQNPAQ
201: TTSTSSSYCC SS

Arabidopsis Description

RABC1Ras-related protein RABC1 [Source:UniProtKB/Swiss-Prot;Acc:O23657]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.