Factsheet for HORVU2Hr1G127520.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G127540.1	Barley	cytosol	100.0	100.0
TraesCSU01G137100.1	Wheat	cytosol, plastid	94.91	93.61
TraesCS3A01G421700.1	Wheat	cytosol, golgi	91.2	92.49
TraesCS2D01G567100.1	Wheat	cytosol	91.67	91.24
TraesCS2B01G617000.1	Wheat	cytosol	91.67	91.24
EES13169	Sorghum	cytosol	89.81	90.23
GSMUA_Achr7P03080_001	Banana	cytosol	84.26	86.67
GSMUA_Achr10P...	Banana	cytosol	82.87	85.24
PGSC0003DMT400063864	Potato	cytosol	81.48	84.21
Solyc04g064510.2.1	Tomato	cytosol	81.48	84.21
CDY14967	Canola	cytosol	81.48	83.02
AT1G43890.1	Thale cress	cytosol	81.02	82.55
Bra036934.1-P	Field mustard	cytosol	80.56	82.08
CDY43856	Canola	cytosol	80.56	81.69
Bra032196.1-P	Field mustard	cytosol	80.56	81.69
CDY47787	Canola	cytosol	80.09	81.6
CDY35803	Canola	cytosol	80.09	81.6
Bra034924.1-P	Field mustard	cytosol	79.63	81.13
CDY69246	Canola	cytosol	57.87	80.13
CDY51571	Canola	cytosol	33.33	80.0
HORVU1Hr1G025450.1	Barley	endoplasmic reticulum	42.59	64.79
HORVU1Hr1G038070.1	Barley	cytosol	57.41	57.14
HORVU4Hr1G079250.1	Barley	cytosol, plastid	55.56	48.19

Protein Annotations

MapMan:22.8.1.3	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:HORVU2Hr1G127520	EnsemblPlants:HORVU2Hr1G127520.1	UniProt:M0YAR4
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF874
SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SMART:SM00177	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000296DA5B	:	:

Description

No Description!

Coordinates

chrchr2H:+:767329515..767331863

Molecular Weight (calculated)

23871.5 Da

IEP (calculated)

5.423

GRAVY (calculated)

-0.195

Length

216 amino acids

Sequence
(BLAST)

001: MDSSTASSSH PQLQPDFDYL FKLLLIGDSG VGKSSLLLRF TADSFEDLSP TIGVDFKVKM VNIAGKKLKL AVWDTAGQER FRTLTSSYYR GAQGIIMVYD
101: VTRRDTFTNL SDIWAKEIDL YSTNQDCIKM LVGNKVDKES ERAVTKKEGI DFAREYGCLF LECSAKTKVN VEQCFEELVL KILDTPSLLA DASSGAKKNI
201: FKQKAPEADA AASGCC

Best Arabidopsis Sequence Match ( AT1G43890.3 )
(BLAST)

001: MGSSSGQPEF DYLFKVLLIG DSGVGKSSLL LSFTSNTFDD LSPTIGVDFK VKYLTIGEKK LKLAIWDTAG QERFRTLTSS YYRGAQGIIM VYDVTRRDTF
101: TNLSDIWAKE IDLYSTNQDC IKMLVGNKVD KESERAVSKK EGIDFAREYG CLFLECSAKT RVNVEQCFEE LVLKILETPS LTAEGSSGGK KNIFKQNPAQ
201: TTSTSSSYCC SS

Arabidopsis Description

RABC1Ras-related protein RABC1 [Source:UniProtKB/Swiss-Prot;Acc:O23657]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.