Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr10P... | Banana | cytosol | 87.14 | 87.14 |
Solyc04g064510.2.1 | Tomato | cytosol | 86.67 | 87.08 |
EES13169 | Sorghum | cytosol | 89.05 | 86.98 |
GSMUA_AchrUn_... | Banana | cytosol | 50.48 | 86.89 |
PGSC0003DMT400063864 | Potato | cytosol | 86.19 | 86.6 |
TraesCS3A01G421700.1 | Wheat | cytosol, golgi | 86.19 | 84.98 |
TraesCS2D01G567100.1 | Wheat | cytosol | 87.62 | 84.79 |
TraesCS2B01G617000.1 | Wheat | cytosol | 87.62 | 84.79 |
HORVU2Hr1G127540.1 | Barley | cytosol | 86.67 | 84.26 |
HORVU2Hr1G127520.1 | Barley | cytosol | 86.67 | 84.26 |
TraesCSU01G137100.1 | Wheat | cytosol, plastid | 87.62 | 84.02 |
CDY14967 | Canola | cytosol | 84.76 | 83.96 |
AT1G43890.1 | Thale cress | cytosol | 84.29 | 83.49 |
CDY51571 | Canola | cytosol | 35.71 | 83.33 |
CDY47787 | Canola | cytosol | 83.81 | 83.02 |
Bra036934.1-P | Field mustard | cytosol | 83.81 | 83.02 |
CDY35803 | Canola | cytosol | 83.33 | 82.55 |
Bra032196.1-P | Field mustard | cytosol | 83.33 | 82.16 |
CDY43856 | Canola | cytosol | 83.33 | 82.16 |
Bra034924.1-P | Field mustard | cytosol | 82.86 | 82.08 |
CDY69246 | Canola | cytosol | 58.57 | 78.85 |
GSMUA_Achr11P... | Banana | cytosol | 60.48 | 60.19 |
GSMUA_AchrUn_... | Banana | cytosol | 60.0 | 58.88 |
GSMUA_Achr5P15600_001 | Banana | cytosol | 40.95 | 55.84 |
GSMUA_Achr4P26700_001 | Banana | cytosol | 13.33 | 25.23 |
GSMUA_Achr5P15590_001 | Banana | cytosol | 10.95 | 18.11 |
Protein Annotations
MapMan:22.8.1.3 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSMUA_Achr7G03080_001 | EnsemblPlants:GSMUA_Achr7P03080_001 | EnsemblPlants:GSMUA_Achr7T03080_001 |
UniProt:M0TE98 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 |
PANTHER:PTHR24073:SF874 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SMART:SM00177 |
SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI000296B74D | : |
Description
GTP-binding protein yptV3 [Source:GMGC_GENE;Acc:GSMUA_Achr7G03080_001]
Coordinates
chr7:+:2444736..2450671
Molecular Weight (calculated)
23387.1 Da
IEP (calculated)
5.457
GRAVY (calculated)
-0.162
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSLSSQPE FDYLFKLLMI GDSGVGKSSL LLRFTLDSFE DLSPTIGVDF KVKMVTLGGK KLKLAIWDTA GQERFRTLTS SYYRGAQGII MVYDVTRRET
101: FTNLSDVWAR EIDLYSTNQD CIKMLVGNKV DKESERAVTK KEGIDFAREY GCLFLECSAK TRVNVEKCFE ELVLKILDTP SLCAEGSAGV KKNIFTQKPA
201: QADASASSCC
101: FTNLSDVWAR EIDLYSTNQD CIKMLVGNKV DKESERAVTK KEGIDFAREY GCLFLECSAK TRVNVEKCFE ELVLKILDTP SLCAEGSAGV KKNIFTQKPA
201: QADASASSCC
001: MGSSSGQPEF DYLFKVLLIG DSGVGKSSLL LSFTSNTFDD LSPTIGVDFK VKYLTIGEKK LKLAIWDTAG QERFRTLTSS YYRGAQGIIM VYDVTRRDTF
101: TNLSDIWAKE IDLYSTNQDC IKMLVGNKVD KESERAVSKK EGIDFAREYG CLFLECSAKT RVNVEQCFEE LVLKILETPS LTAEGSSGGK KNIFKQNPAQ
201: TTSTSSSYCC SS
101: TNLSDIWAKE IDLYSTNQDC IKMLVGNKVD KESERAVSKK EGIDFAREYG CLFLECSAKT RVNVEQCFEE LVLKILETPS LTAEGSSGGK KNIFKQNPAQ
201: TTSTSSSYCC SS
Arabidopsis Description
RABC1Ras-related protein RABC1 [Source:UniProtKB/Swiss-Prot;Acc:O23657]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.