Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P03080_001 | Banana | cytosol | 86.89 | 50.48 |
| GSMUA_Achr10P... | Banana | cytosol | 85.25 | 49.52 |
| GSMUA_Achr5P15600_001 | Banana | cytosol | 61.48 | 48.7 |
| GSMUA_Achr11P... | Banana | cytosol | 58.2 | 33.65 |
| GSMUA_AchrUn_... | Banana | cytosol | 57.38 | 32.71 |
| GSMUA_Achr4P26700_001 | Banana | cytosol | 11.48 | 12.61 |
| GSMUA_Achr5P15590_001 | Banana | cytosol | 6.56 | 6.3 |
Protein Annotations
| MapMan:22.8.1.3 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSMUA_AchrUn_randomG17690_001 | EnsemblPlants:GSMUA_AchrUn_randomP17690_001 | EnsemblPlants:GSMUA_AchrUn_randomT17690_001 |
| UniProt:M0UA28 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 |
| PANTHER:PTHR24073:SF874 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI000295B983 | : | : | : |
Description
GTP-binding protein yptV3 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG17690_001]
Coordinates
chrchrUn_random:+:84038088..84041686
Molecular Weight (calculated)
13875.6 Da
IEP (calculated)
4.934
GRAVY (calculated)
-0.225
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MSANSEVIYV AAGQERFRTL TSSYYRGAQG IIMVYDVTRR DTFTNLSDVW AKEIDLYSTN QDCIKMLVGN KVDKENERVV TKKEGIDFAR EYGCLFVECS
101: AKTRVNVEEI VLKILDTPNL CA
101: AKTRVNVEEI VLKILDTPNL CA
001: MGSSSGQPEF DYLFKVLLIG DSGVGKSSLL LSFTSNTFDD LSPTIGVDFK VKYLTIGEKK LKLAIWDTAG QERFRTLTSS YYRGAQGIIM VYDVTRRDTF
101: TNLSDIWAKE IDLYSTNQDC IKMLVGNKVD KESERAVSKK EGIDFAREYG CLFLECSAKT RVNVEQCFEE LVLKILETPS LTAEGSSGGK KNIFKQNPAQ
201: TTSTSSSYCC SS
101: TNLSDIWAKE IDLYSTNQDC IKMLVGNKVD KESERAVSKK EGIDFAREYG CLFLECSAKT RVNVEQCFEE LVLKILETPS LTAEGSSGGK KNIFKQNPAQ
201: TTSTSSSYCC SS
Arabidopsis Description
RABC1Ras-related protein RABC1 [Source:UniProtKB/Swiss-Prot;Acc:O23657]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.