Factsheet for GSMUA_AchrUn_randomP17110_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	89.25	90.52
TraesCS4B01G310800.1	Wheat	cytosol, extracellular	73.36	75.85
TraesCS4A01G410700.1	Wheat	cytosol, extracellular	72.9	75.36
TraesCS4D01G308700.1	Wheat	cytosol, extracellular	72.43	74.88
Os03t0146000-01	Rice	plasma membrane	73.36	74.76
EER95509	Sorghum	cytosol	72.9	74.29
VIT_08s0007g04740.t01	Wine grape	cytosol	71.03	72.04
KRH19962	Soybean	cytosol	70.09	71.09
TraesCS1D01G142000.1	Wheat	cytosol, extracellular	70.56	70.56
EER91530	Sorghum	cytosol	71.5	70.51
KRH32565	Soybean	extracellular	69.63	70.28
TraesCS1B01G158500.1	Wheat	cytosol	71.03	70.05
TraesCS1A01G143100.1	Wheat	cytosol	71.03	70.05
HORVU1Hr1G038070.1	Barley	cytosol	71.03	70.05
AT5G03530.1	Thale cress	cytosol	68.69	70.0
CDY10375	Canola	cytosol	68.69	70.0
Bra028830.1-P	Field mustard	cytosol	69.16	69.81
CDY04887	Canola	cytosol	69.16	69.81
CDY44372	Canola	cytosol	69.16	69.81
CDX70301	Canola	cytosol	68.22	69.52
Bra009524.1-P	Field mustard	cytosol	67.76	69.05
Solyc09g008460.2.1	Tomato	plastid	69.63	68.98
Os10t0456600-01	Rice	cytosol	71.5	68.92
PGSC0003DMT400009952	Potato	cytosol	69.16	68.52
KRH67770	Soybean	endoplasmic reticulum	66.82	67.77
KRG96048	Soybean	cytosol	66.36	67.3
Solyc10g086310.1.1	Tomato	cytosol	65.42	66.99
PGSC0003DMT400049302	Potato	cytosol	65.89	65.58
CDY41571	Canola	cytosol	62.15	65.2
CDY54608	Canola	cytosol	62.15	65.2
AT3G09910.1	Thale cress	cytosol	62.15	64.88
CDY11028	Canola	cytosol	26.64	64.77
Bra029804.1-P	Field mustard	cytosol	61.22	64.22
Zm00001d032811_P002	Maize	cytosol	73.36	63.56
Zm00001d014097_P002	Maize	cytosol	72.43	62.75
HORVU4Hr1G079250.1	Barley	cytosol, plastid	72.43	62.25
GSMUA_Achr7P03080_001	Banana	cytosol	58.88	60.0
GSMUA_Achr10P...	Banana	cytosol	58.88	60.0
GSMUA_AchrUn_...	Banana	cytosol	32.71	57.38
Zm00001d048393_P001	Maize	plastid	71.96	49.84
GSMUA_Achr5P15600_001	Banana	cytosol	35.05	48.7
GSMUA_Achr4P26700_001	Banana	cytosol	11.21	21.62
GSMUA_Achr5P15590_001	Banana	cytosol	11.68	19.68

Protein Annotations

MapMan:22.8.1.3	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_AchrUn_randomG17110_001	EnsemblPlants:GSMUA_AchrUn_randomP17110_001	EnsemblPlants:GSMUA_AchrUn_randomT17110_001
UniProt:M0U9X0	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF879	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000294EC7D	:	:

Description

GTP-binding protein yptV3 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG17110_001]

Coordinates

chrchrUn_random:+:81011976..81018298

Molecular Weight (calculated)

23779.4 Da

IEP (calculated)

6.770

GRAVY (calculated)

-0.232

Length

214 amino acids

Sequence
(BLAST)

001: MGSSSGPGHS YDYSFKILLI GDSAVGKSSL LVSFISNHLG EDLAPTIGVD FKIKHLTVDD KKLKLTIWDT AGQERFRTLT SSYYRGCQGI ILVYDVTKRE
101: TFTNLADVWV KEVELYATNH NCVKVLVGNK VDKEADRMVT REEGNAFANE YGCLFLECSA KTRANVERCF EELALKILEV PKLVEEGSVP VKRNILKLQQ
201: EQQHAHPGGG CCSS

Best Arabidopsis Sequence Match ( AT5G03530.1 )
(BLAST)

001: MGSSSGQSGY DLSFKILLIG DSGVGKSSLL VSFISSSVED LAPTIGVDFK IKQLTVGGKR LKLTIWDTAG QERFRTLTSS YYRGAQGIIL VYDVTRRETF
101: TNLVDVWGKE IELYSTNQEC VRMLVGNKVD RESERGVSRE EGIALAKELN CMFLECSART RQNVEQCFEE LALKIMEVPS LLEEGSSAVK RNILKQKPEH
201: QTNTQSGCCS

Arabidopsis Description

RABC2ARABC2A [Source:UniProtKB/TrEMBL;Acc:A0A178UJG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.