Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028830.1-P | Field mustard | cytosol | 99.06 | 99.06 |
| CDY04887 | Canola | cytosol | 98.58 | 98.58 |
| CDX70301 | Canola | cytosol | 94.34 | 95.24 |
| CDY10375 | Canola | cytosol | 92.92 | 93.81 |
| AT5G03530.1 | Thale cress | cytosol | 91.51 | 92.38 |
| CDY11028 | Canola | cytosol | 37.74 | 90.91 |
| VIT_08s0007g04740.t01 | Wine grape | cytosol | 84.43 | 84.83 |
| KRH19962 | Soybean | cytosol | 83.02 | 83.41 |
| KRH67770 | Soybean | endoplasmic reticulum | 82.55 | 82.94 |
| KRG96048 | Soybean | cytosol | 82.08 | 82.46 |
| KRH32565 | Soybean | extracellular | 82.08 | 82.08 |
| CDY41571 | Canola | cytosol | 77.83 | 80.88 |
| Solyc09g008460.2.1 | Tomato | plastid | 82.08 | 80.56 |
| PGSC0003DMT400009952 | Potato | cytosol | 81.6 | 80.09 |
| CDY54608 | Canola | cytosol | 76.89 | 79.9 |
| Solyc10g086310.1.1 | Tomato | cytosol | 77.83 | 78.95 |
| PGSC0003DMT400049302 | Potato | cytosol | 78.77 | 77.67 |
| CDY43856 | Canola | cytosol | 72.64 | 72.3 |
| CDY14967 | Canola | cytosol | 72.17 | 72.17 |
| CDY69246 | Canola | cytosol | 52.83 | 71.79 |
| CDY47787 | Canola | cytosol | 71.7 | 71.7 |
| CDY35803 | Canola | cytosol | 71.7 | 71.7 |
| GSMUA_Achr11P... | Banana | cytosol | 69.34 | 69.67 |
| GSMUA_AchrUn_... | Banana | cytosol | 69.81 | 69.16 |
| TraesCS4B01G310800.1 | Wheat | cytosol, extracellular | 65.57 | 67.15 |
| Os03t0146000-01 | Rice | plasma membrane | 66.51 | 67.14 |
| TraesCS4A01G410700.1 | Wheat | cytosol, extracellular | 65.09 | 66.67 |
| EER91530 | Sorghum | cytosol | 67.92 | 66.36 |
| TraesCS4D01G308700.1 | Wheat | cytosol, extracellular | 64.62 | 66.18 |
| EER95509 | Sorghum | cytosol | 65.09 | 65.71 |
| TraesCS1D01G142000.1 | Wheat | cytosol, extracellular | 66.04 | 65.42 |
| Os10t0456600-01 | Rice | cytosol | 67.45 | 64.41 |
| HORVU1Hr1G038070.1 | Barley | cytosol | 65.57 | 64.06 |
| TraesCS1A01G143100.1 | Wheat | cytosol | 65.57 | 64.06 |
| TraesCS1B01G158500.1 | Wheat | cytosol | 65.57 | 64.06 |
| CDY51571 | Canola | cytosol | 26.89 | 63.33 |
| Zm00001d032811_P002 | Maize | cytosol | 66.98 | 57.49 |
| Zm00001d014097_P002 | Maize | cytosol | 66.51 | 57.09 |
| HORVU4Hr1G079250.1 | Barley | cytosol, plastid | 64.62 | 55.02 |
| Zm00001d048393_P001 | Maize | plastid | 64.15 | 44.01 |
Protein Annotations
| MapMan:22.8.1.3 | Gene3D:3.40.50.300 | GO:A0A078I2V5 | UniProt:A0A078I2V5 | EnsemblPlants:CDY44372 | ProteinID:CDY44372 |
| ProteinID:CDY44372.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00080038001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| ScanProsite:PS00675 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF579 | SMART:SM00173 | SMART:SM00174 |
| SMART:SM00175 | SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Sigma_54_int_dom_ATP-bd_1 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EC7D69 | SEG:seg | : | : |
Description
BnaC02g03050DBnaC02g03050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2V5]
Coordinates
chrLK032587:-:181509..184320
Molecular Weight (calculated)
23482.0 Da
IEP (calculated)
5.438
GRAVY (calculated)
-0.236
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSSGQSGY DLSFKILLIG DSGVGKSSLL VSFISNAVED LAPTIGVDFK IKQLTVGDKR LKLTIWDTAG QERFRTLTSS YYRGAQGIIL VYDVTRRETF
101: TNLVDVWSKE IELYSTNQDC VTMLVGNKVD RESERGVSRE EGIALAKELK CMFLECSART RQNVEQCFEE LALKIMEVPS LLEEGSSAVK RNILKQNSSE
201: HQTSPRAGCC SS
101: TNLVDVWSKE IELYSTNQDC VTMLVGNKVD RESERGVSRE EGIALAKELK CMFLECSART RQNVEQCFEE LALKIMEVPS LLEEGSSAVK RNILKQNSSE
201: HQTSPRAGCC SS
001: MGSSSGQSGY DLSFKILLIG DSGVGKSSLL VSFISSSVED LAPTIGVDFK IKQLTVGGKR LKLTIWDTAG QERFRTLTSS YYRGAQGIIL VYDVTRRETF
101: TNLVDVWGKE IELYSTNQEC VRMLVGNKVD RESERGVSRE EGIALAKELN CMFLECSART RQNVEQCFEE LALKIMEVPS LLEEGSSAVK RNILKQKPEH
201: QTNTQSGCCS
101: TNLVDVWGKE IELYSTNQEC VRMLVGNKVD RESERGVSRE EGIALAKELN CMFLECSART RQNVEQCFEE LALKIMEVPS LLEEGSSAVK RNILKQKPEH
201: QTNTQSGCCS
Arabidopsis Description
RABC2ARABC2A [Source:UniProtKB/TrEMBL;Acc:A0A178UJG3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.