CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028830.1-P	Field mustard	cytosol	99.53	99.53
CDY44372	Canola	cytosol	98.58	98.58
CDX70301	Canola	cytosol	95.28	96.19
CDY10375	Canola	cytosol	93.87	94.76
CDY11028	Canola	cytosol	38.68	93.18
AT5G03530.1	Thale cress	cytosol	91.98	92.86
VIT_08s0007g04740.t01	Wine grape	cytosol	84.43	84.83
KRH19962	Soybean	cytosol	82.55	82.94
KRH67770	Soybean	endoplasmic reticulum	82.08	82.46
KRH32565	Soybean	extracellular	82.08	82.08
KRG96048	Soybean	cytosol	81.6	81.99
CDY41571	Canola	cytosol	78.77	81.86
CDY54608	Canola	cytosol	77.83	80.88
Solyc09g008460.2.1	Tomato	plastid	81.6	80.09
PGSC0003DMT400009952	Potato	cytosol	81.13	79.63
Solyc10g086310.1.1	Tomato	cytosol	77.36	78.47
PGSC0003DMT400049302	Potato	cytosol	78.3	77.21
CDY14967	Canola	cytosol	72.64	72.64
CDY35803	Canola	cytosol	72.64	72.64
CDY69246	Canola	cytosol	53.3	72.44
CDY43856	Canola	cytosol	72.64	72.3
CDY47787	Canola	cytosol	72.17	72.17
GSMUA_Achr11P...	Banana	cytosol	69.34	69.67
GSMUA_AchrUn_...	Banana	cytosol	69.81	69.16
TraesCS4B01G310800.1	Wheat	cytosol, extracellular	66.04	67.63
TraesCS4A01G410700.1	Wheat	cytosol, extracellular	65.57	67.15
Os03t0146000-01	Rice	plasma membrane	66.51	67.14
TraesCS4D01G308700.1	Wheat	cytosol, extracellular	65.09	66.67
EER91530	Sorghum	cytosol	67.92	66.36
EER95509	Sorghum	cytosol	65.09	65.71
TraesCS1D01G142000.1	Wheat	cytosol, extracellular	66.04	65.42
Os10t0456600-01	Rice	cytosol	67.45	64.41
TraesCS1B01G158500.1	Wheat	cytosol	65.57	64.06
TraesCS1A01G143100.1	Wheat	cytosol	65.57	64.06
HORVU1Hr1G038070.1	Barley	cytosol	65.57	64.06
CDY51571	Canola	cytosol	26.89	63.33
Zm00001d032811_P002	Maize	cytosol	66.98	57.49
Zm00001d014097_P002	Maize	cytosol	66.51	57.09
HORVU4Hr1G079250.1	Barley	cytosol, plastid	65.09	55.42
Zm00001d048393_P001	Maize	plastid	64.15	44.01

Protein Annotations

MapMan:22.8.1.3	Gene3D:3.40.50.300	GO:A0A078EV71	EnsemblPlants:CDY04887	ProteinID:CDY04887	ProteinID:CDY04887.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00119604001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	ScanProsite:PS00675
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF579	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SMART:SM00177	SUPFAM:SSF52540	InterPro:Sigma_54_int_dom_ATP-bd_1	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
TIGRFAMs:TIGR00231	UniParc:UPI0004EDC710	SEG:seg	:	:	:

Description

BnaAnng00690D

Coordinates

chrLK031958:-:539351..542102

Molecular Weight (calculated)

23498.0 Da

IEP (calculated)

5.147

GRAVY (calculated)

-0.242

Length

212 amino acids

Sequence
(BLAST)

001: MGSSSGQSGY DLSFKILLIG DSGVGKSSLL VSFISNTVED LAPTIGVDFK IKQLTVGDKR LKLTIWDTAG QERFRTLTSS YYRGAQGIIL VYDVTRRETF
101: TNLVDVWSKE IELYSTNQDC VTMLVGNKVD RESERGVSRE EGIALAKELK CMFLECSART RQNVEQCFEE LALKIMEVPS LLEEGSSAVK RNILKQNSSE
201: HQTTPQAGCC SS

Best Arabidopsis Sequence Match ( AT5G03530.1 )
(BLAST)

001: MGSSSGQSGY DLSFKILLIG DSGVGKSSLL VSFISSSVED LAPTIGVDFK IKQLTVGGKR LKLTIWDTAG QERFRTLTSS YYRGAQGIIL VYDVTRRETF
101: TNLVDVWGKE IELYSTNQEC VRMLVGNKVD RESERGVSRE EGIALAKELN CMFLECSART RQNVEQCFEE LALKIMEVPS LLEEGSSAVK RNILKQKPEH
201: QTNTQSGCCS

Arabidopsis Description

RABC2ARABC2A [Source:UniProtKB/TrEMBL;Acc:A0A178UJG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.