Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11028 | Canola | cytosol | 41.9 | 100.0 |
| CDX70301 | Canola | cytosol | 97.14 | 97.14 |
| AT5G03530.1 | Thale cress | cytosol | 96.67 | 96.67 |
| CDY04887 | Canola | cytosol | 94.76 | 93.87 |
| CDY44372 | Canola | cytosol | 93.81 | 92.92 |
| VIT_08s0007g04740.t01 | Wine grape | cytosol | 87.14 | 86.73 |
| KRH19962 | Soybean | cytosol | 83.33 | 82.94 |
| CDY41571 | Canola | cytosol | 80.48 | 82.84 |
| KRH32565 | Soybean | extracellular | 83.33 | 82.55 |
| KRH67770 | Soybean | endoplasmic reticulum | 82.86 | 82.46 |
| CDY54608 | Canola | cytosol | 80.0 | 82.35 |
| KRG96048 | Soybean | cytosol | 82.38 | 81.99 |
| Solyc09g008460.2.1 | Tomato | plastid | 83.81 | 81.48 |
| PGSC0003DMT400009952 | Potato | cytosol | 83.33 | 81.02 |
| Solyc10g086310.1.1 | Tomato | cytosol | 79.52 | 79.9 |
| PGSC0003DMT400049302 | Potato | cytosol | 80.48 | 78.6 |
| CDY14967 | Canola | cytosol | 72.38 | 71.7 |
| CDY35803 | Canola | cytosol | 72.38 | 71.7 |
| CDY69246 | Canola | cytosol | 52.86 | 71.15 |
| CDY43856 | Canola | cytosol | 71.9 | 70.89 |
| CDY47787 | Canola | cytosol | 71.43 | 70.75 |
| GSMUA_Achr11P... | Banana | cytosol | 69.52 | 69.19 |
| GSMUA_AchrUn_... | Banana | cytosol | 70.0 | 68.69 |
| Os03t0146000-01 | Rice | plasma membrane | 68.57 | 68.57 |
| TraesCS4B01G310800.1 | Wheat | cytosol, extracellular | 66.19 | 67.15 |
| EER95509 | Sorghum | cytosol | 67.14 | 67.14 |
| EER91530 | Sorghum | cytosol | 69.05 | 66.82 |
| TraesCS4A01G410700.1 | Wheat | cytosol, extracellular | 65.71 | 66.67 |
| TraesCS4D01G308700.1 | Wheat | cytosol, extracellular | 65.24 | 66.18 |
| TraesCS1D01G142000.1 | Wheat | cytosol, extracellular | 67.14 | 65.89 |
| Os10t0456600-01 | Rice | cytosol | 67.62 | 63.96 |
| TraesCS1A01G143100.1 | Wheat | cytosol | 65.71 | 63.59 |
| TraesCS1B01G158500.1 | Wheat | cytosol | 65.71 | 63.59 |
| HORVU1Hr1G038070.1 | Barley | cytosol | 65.71 | 63.59 |
| CDY51571 | Canola | cytosol | 27.14 | 63.33 |
| Zm00001d032811_P002 | Maize | cytosol | 68.1 | 57.89 |
| Zm00001d014097_P002 | Maize | cytosol | 67.62 | 57.49 |
| HORVU4Hr1G079250.1 | Barley | cytosol, plastid | 65.24 | 55.02 |
| Zm00001d048393_P001 | Maize | plastid | 66.19 | 44.98 |
Protein Annotations
| MapMan:22.8.1.3 | Gene3D:3.40.50.300 | GO:A0A078F790 | UniProt:A0A078F790 | EnsemblPlants:CDY10375 | ProteinID:CDY10375 |
| ProteinID:CDY10375.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00032277001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| ScanProsite:PS00675 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF579 | SMART:SM00173 | SMART:SM00174 |
| SMART:SM00175 | SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Sigma_54_int_dom_ATP-bd_1 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EF372B | SEG:seg | : | : |
Description
BnaCnng02760DBnaCnng02760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F790]
Coordinates
chrLK032003:+:118166..119641
Molecular Weight (calculated)
23281.9 Da
IEP (calculated)
7.057
GRAVY (calculated)
-0.223
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSSGQSGY DLSFKILLIG DSGVGKSSLL VSFISTSVED LAPTIGVDFK IKQLTVGGKR LKLTIWDTAG QERFRTLTSS YYRGAQGIIL VYDVTRRETF
101: TNLVDVWGKE IELYSTNQDC VRMLVGNKVD RESERGVSRE EGIALAKELK CMFLECSART RQNVEQCFEE LALKIMEVPS LLEEGSSAVK RNILKQKTEH
201: QTTSQAGCCS
101: TNLVDVWGKE IELYSTNQDC VRMLVGNKVD RESERGVSRE EGIALAKELK CMFLECSART RQNVEQCFEE LALKIMEVPS LLEEGSSAVK RNILKQKTEH
201: QTTSQAGCCS
001: MGSSSGQSGY DLSFKILLIG DSGVGKSSLL VSFISSSVED LAPTIGVDFK IKQLTVGGKR LKLTIWDTAG QERFRTLTSS YYRGAQGIIL VYDVTRRETF
101: TNLVDVWGKE IELYSTNQEC VRMLVGNKVD RESERGVSRE EGIALAKELN CMFLECSART RQNVEQCFEE LALKIMEVPS LLEEGSSAVK RNILKQKPEH
201: QTNTQSGCCS
101: TNLVDVWGKE IELYSTNQEC VRMLVGNKVD RESERGVSRE EGIALAKELN CMFLECSART RQNVEQCFEE LALKIMEVPS LLEEGSSAVK RNILKQKPEH
201: QTNTQSGCCS
Arabidopsis Description
RABC2ARABC2A [Source:UniProtKB/TrEMBL;Acc:A0A178UJG3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.