Factsheet for TraesCS1A01G143100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G158500.1	Wheat	cytosol	99.54	99.54
HORVU1Hr1G038070.1	Barley	cytosol	98.16	98.16
TraesCS1D01G142000.1	Wheat	cytosol, extracellular	93.09	94.39
EER91530	Sorghum	cytosol	85.25	85.25
Os10t0456600-01	Rice	cytosol	86.64	84.68
TraesCS4A01G410700.1	Wheat	cytosol, extracellular	76.96	80.68
Zm00001d032811_P002	Maize	cytosol	87.1	76.52
Zm00001d014097_P002	Maize	cytosol	85.71	75.3
GSMUA_Achr11P...	Banana	cytosol	70.05	72.04
GSMUA_AchrUn_...	Banana	cytosol	70.05	71.03
KRH19962	Soybean	cytosol	65.9	67.77
Solyc09g008460.2.1	Tomato	plastid	67.28	67.59
VIT_08s0007g04740.t01	Wine grape	cytosol	64.98	66.82
PGSC0003DMT400009952	Potato	cytosol	66.36	66.67
KRH32565	Soybean	extracellular	64.98	66.51
KRH67770	Soybean	endoplasmic reticulum	64.52	66.35
KRG96048	Soybean	cytosol	64.06	65.88
CDY10375	Canola	cytosol	63.59	65.71
CDX70301	Canola	cytosol	63.59	65.71
CDY44372	Canola	cytosol	64.06	65.57
CDY04887	Canola	cytosol	64.06	65.57
Bra028830.1-P	Field mustard	cytosol	64.06	65.57
Bra009524.1-P	Field mustard	cytosol	63.13	65.24
AT5G03530.1	Thale cress	cytosol	63.13	65.24
CDY11028	Canola	cytosol	25.81	63.64
Solyc10g086310.1.1	Tomato	cytosol	61.29	63.64
PGSC0003DMT400049302	Potato	cytosol	62.67	63.26
AT3G09910.1	Thale cress	cytosol	59.45	62.93
CDY41571	Canola	cytosol	58.99	62.75
CDY54608	Canola	cytosol	58.53	62.25
Bra029804.1-P	Field mustard	cytosol	58.06	61.76
TraesCS3A01G421700.1	Wheat	cytosol, golgi	55.3	56.34

Protein Annotations

MapMan:22.8.1.3	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF879	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SMART:SM00177	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231
EnsemblPlantsGene:TraesCS1A01G143100	EnsemblPlants:TraesCS1A01G143100.1	TIGR:cd01863	SEG:seg	:	:

Description

No Description!

Coordinates

chr1A:-:245527888..245536646

Molecular Weight (calculated)

23679.2 Da

IEP (calculated)

5.453

GRAVY (calculated)

-0.213

Length

217 amino acids

Sequence
(BLAST)

001: MGVSPVSPGG SGGYECSFKI LLIGDSGVGK SSLLVSFVAA ANLDDDIAPT IGVDFKIKFL TVGGKKLKLT IWDTAGQERF RTITSSYYRG AQGIILVYDV
101: AKRESFTNLG DVWTKEIDSN SSNKDCIKML VGNKVDKDDE RTVTREEGLA FAQESGCLFL ESSAKTRENV ENCFEELVLK ILEVPSLLEE GSSSVVKRNI
201: LKKQQESHAK YGGRCCQ

Best Arabidopsis Sequence Match ( AT1G43890.1 )
(BLAST)

001: MGSSSGQPEF DYLFKVLLIG DSGVGKSSLL LSFTSNTFDD LSPTIGVDFK VKYLTIGEKK LKLAIWDTAG QERFRTLTSS YYRGAQGIIM VYDVTRRDTF
101: TNLSDIWAKE IDLYSTNQDC IKMLVGNKVD KESERAVSKK EGIDFAREYG CLFLECSAKT RVNVEQCFEE LVLKILETPS LTAEGSSGGK KNIFKQNPAQ
201: TTSTSSSYCC SS

Arabidopsis Description

RABC1Ras-related protein RABC1 [Source:UniProtKB/Swiss-Prot;Acc:O23657]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.