Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029804.1-P | Field mustard | cytosol | 90.24 | 90.69 |
| CDY41571 | Canola | cytosol | 87.8 | 88.24 |
| CDY54608 | Canola | cytosol | 86.83 | 87.25 |
| AT5G03530.1 | Thale cress | cytosol | 81.46 | 79.52 |
| VIT_08s0007g04740.t01 | Wine grape | cytosol | 80.49 | 78.2 |
| KRG96048 | Soybean | cytosol | 76.1 | 73.93 |
| KRH67770 | Soybean | endoplasmic reticulum | 75.61 | 73.46 |
| Solyc10g086310.1.1 | Tomato | cytosol | 74.63 | 73.21 |
| KRH19962 | Soybean | cytosol | 75.12 | 72.99 |
| KRH32565 | Soybean | extracellular | 75.12 | 72.64 |
| Solyc09g008460.2.1 | Tomato | plastid | 76.1 | 72.22 |
| PGSC0003DMT400049302 | Potato | cytosol | 75.61 | 72.09 |
| PGSC0003DMT400009952 | Potato | cytosol | 75.61 | 71.76 |
| AT1G43890.1 | Thale cress | cytosol | 67.8 | 65.57 |
| Os03t0146000-01 | Rice | plasma membrane | 64.88 | 63.33 |
| GSMUA_Achr11P... | Banana | cytosol | 64.39 | 62.56 |
| GSMUA_AchrUn_... | Banana | cytosol | 64.88 | 62.15 |
| TraesCS4B01G310800.1 | Wheat | cytosol, extracellular | 61.95 | 61.35 |
| TraesCS1D01G142000.1 | Wheat | cytosol, extracellular | 63.9 | 61.22 |
| EER95509 | Sorghum | cytosol | 62.44 | 60.95 |
| TraesCS4A01G410700.1 | Wheat | cytosol, extracellular | 61.46 | 60.87 |
| TraesCS4D01G308700.1 | Wheat | cytosol, extracellular | 60.98 | 60.39 |
| HORVU1Hr1G038070.1 | Barley | cytosol | 63.41 | 59.91 |
| EER91530 | Sorghum | cytosol | 63.41 | 59.91 |
| TraesCS1A01G143100.1 | Wheat | cytosol | 62.93 | 59.45 |
| TraesCS1B01G158500.1 | Wheat | cytosol | 62.93 | 59.45 |
| Os10t0456600-01 | Rice | cytosol | 62.93 | 58.11 |
| Zm00001d032811_P002 | Maize | cytosol | 63.9 | 53.04 |
| Zm00001d014097_P002 | Maize | cytosol | 63.41 | 52.63 |
| HORVU4Hr1G079250.1 | Barley | cytosol, plastid | 60.98 | 50.2 |
| Zm00001d048393_P001 | Maize | plastid | 62.44 | 41.42 |
Protein Annotations
| MapMan:22.8.1.3 | Gene3D:3.40.50.300 | EntrezGene:820149 | UniProt:A0A178V665 | ProteinID:AAF23245.1 | ProteinID:AEE74829.1 |
| ProteinID:AEE74830.1 | ProteinID:AEE74831.1 | ArrayExpress:AT3G09910 | EnsemblPlantsGene:AT3G09910 | RefSeq:AT3G09910 | TAIR:AT3G09910 |
| RefSeq:AT3G09910-TAIR-G | EnsemblPlants:AT3G09910.1 | TAIR:AT3G09910.1 | Symbol:ATRAB18C | EMBL:BT012209 | EMBL:BT012396 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016787 | RefSeq:NP_001189850.1 |
| RefSeq:NP_001189851.1 | RefSeq:NP_187602.1 | ProteinID:OAP01720.1 | InterPro:P-loop_NTPase | PFAM:PF00071 | PO:PO:0000293 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009030 | PO:PO:0009031 | PRINTS:PR00449 |
| ScanProsite:PS00675 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF579 | UniProt:Q9SF92 | Symbol:RABC2b |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 |
| InterPro:Sigma_54_int_dom_ATP-bd_1 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI00000A277D | SEG:seg |
Description
RABC2BRABC2b [Source:UniProtKB/TrEMBL;Acc:A0A178V665]
Coordinates
chr3:-:3036611..3038502
Molecular Weight (calculated)
22905.5 Da
IEP (calculated)
8.361
GRAVY (calculated)
-0.303
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSSGQSGY DLSFKILLIG DSGVGKSSLL LSFISSSVED LAPTIGVDFK IKQMKVRGKR LKLTIWDTAG QEKFRTLTSS YFRGSQGIIL VYDVTKRETF
101: LNLADIWAKE IELYSTNHDC IKMLVGNKVD RESERKVSRE EGMALAKDLN CLFHECSART RENVNGCFEE LALKIMEVPS LLEEGSSSVK RKPDYRAHQG
201: RCCSS
101: LNLADIWAKE IELYSTNHDC IKMLVGNKVD RESERKVSRE EGMALAKDLN CLFHECSART RENVNGCFEE LALKIMEVPS LLEEGSSSVK RKPDYRAHQG
201: RCCSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.