Factsheet for Os10t0456600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91530	Sorghum	cytosol	85.59	87.56
TraesCS1A01G143100.1	Wheat	cytosol	84.68	86.64
TraesCS1B01G158500.1	Wheat	cytosol	84.23	86.18
HORVU1Hr1G038070.1	Barley	cytosol	83.78	85.71
TraesCS1D01G142000.1	Wheat	cytosol, extracellular	81.98	85.05
Os03t0146000-01	Rice	plasma membrane	77.93	82.38
Zm00001d032811_P002	Maize	cytosol	87.84	78.95
Zm00001d014097_P002	Maize	cytosol	86.49	77.73
GSMUA_Achr11P...	Banana	cytosol	70.72	74.41
GSMUA_AchrUn_...	Banana	cytosol	68.92	71.5
KRH19962	Soybean	cytosol	65.32	68.72
VIT_08s0007g04740.t01	Wine grape	cytosol	64.86	68.25
KRH67770	Soybean	endoplasmic reticulum	64.86	68.25
CDY11028	Canola	cytosol	27.03	68.18
CDX70301	Canola	cytosol	64.41	68.1
KRG96048	Soybean	cytosol	64.41	67.77
CDY10375	Canola	cytosol	63.96	67.62
Bra009524.1-P	Field mustard	cytosol	63.96	67.62
Solyc09g008460.2.1	Tomato	plastid	65.77	67.59
KRH32565	Soybean	extracellular	64.41	67.45
CDY44372	Canola	cytosol	64.41	67.45
CDY04887	Canola	cytosol	64.41	67.45
Bra028830.1-P	Field mustard	cytosol	64.41	67.45
AT5G03530.1	Thale cress	cytosol	63.51	67.14
PGSC0003DMT400009952	Potato	cytosol	65.32	67.13
PGSC0003DMT400049302	Potato	cytosol	61.26	63.26
CDY41571	Canola	cytosol	58.11	63.24
CDY54608	Canola	cytosol	58.11	63.24
Solyc10g086310.1.1	Tomato	cytosol	59.46	63.16
AT3G09910.1	Thale cress	cytosol	58.11	62.93
Bra029804.1-P	Field mustard	cytosol	56.76	61.76

Protein Annotations

MapMan:22.8.1.3	Gene3D:3.40.50.300	EntrezGene:4348795	ProteinID:AAP54088.1	EMBL:AK102843	ProteinID:BAF26670.1
ProteinID:BAT11133.1	ProteinID:EAZ16309.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0016787	EnsemblPlantsGene:Os10g0456600	EnsemblPlants:Os10t0456600-01	InterPro:P-loop_NTPase	PFAM:PF00071
PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF879	UniProt:Q7XDQ3	SMART:SM00173
SMART:SM00174	SMART:SM00175	SMART:SM00176	SMART:SM00177	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00001A3CE4	RefSeq:XP_015614518.1	SEG:seg	:

Description

small GTP-binding protein OsRab18B1ADP-ribosylation factor domain containing protein. (Os10t0456600-01)

Coordinates

chr10:-:16693561..16697503

Molecular Weight (calculated)

23887.5 Da

IEP (calculated)

6.139

GRAVY (calculated)

-0.221

Length

222 amino acids

Sequence
(BLAST)

001: MGSPGAGSSG GGGGGHECSF KILLIGDSGV GKSSLLVSFV VAAAAAHLDD DIAPTIGVDF KIKFLTIGGK KLKLTIWDTA GQERFRTITS SYYRGAQGII
101: LVYDVTKRES FTNLAEVWSK EIESHSSNKD CIKMLVGNKI DKEDERTVTR EEGLAFAEES GCLFLESSAK TRDNVEKCFE ELALKIMDVP SLLEEGSSSV
201: VKRNILKQKQ ESQAKHGGGC CQ

Best Arabidopsis Sequence Match ( AT5G03530.1 )
(BLAST)

001: MGSSSGQSGY DLSFKILLIG DSGVGKSSLL VSFISSSVED LAPTIGVDFK IKQLTVGGKR LKLTIWDTAG QERFRTLTSS YYRGAQGIIL VYDVTRRETF
101: TNLVDVWGKE IELYSTNQEC VRMLVGNKVD RESERGVSRE EGIALAKELN CMFLECSART RQNVEQCFEE LALKIMEVPS LLEEGSSAVK RNILKQKPEH
201: QTNTQSGCCS

Arabidopsis Description

RABC2ARABC2A [Source:UniProtKB/TrEMBL;Acc:A0A178UJG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.